Detailed information NTG0949898

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACHWYH_RS01385
• Genome accession: NZ_CP172084
• Coordinates: 281730..283070 (+)
• Length: 446 a.a.
• NCBI ID: WP_112103548.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain GA81666
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 276730..288070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHWYH_RS01370	lrp	277785..278264 (+)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-
ACHWYH_RS01375	-	278266..281034 (+)	2769	WP_112103547.1	DNA translocase FtsK	-
ACHWYH_RS01380	lolA	281052..281669 (+)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
ACHWYH_RS01385	rarA	281730..283070 (+)	1341	WP_112103548.1	replication-associated recombination protein A	Machinery gene
ACHWYH_RS01390	aroA	283156..284454 (-)	1299	WP_032824061.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
ACHWYH_RS01395	purU	284454..285290 (-)	837	WP_032824060.1	formyltetrahydrofolate deformylase	-
ACHWYH_RS01400	-	285361..285765 (-)	405	WP_032824059.1	H-NS family nucleoid-associated regulatory protein	-
ACHWYH_RS01405	-	286209..287729 (+)	1521	WP_032824058.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50306.17 Da
• Isoelectric Point: 6.1394

>NTDB_id=949898 ACHWYH_RS01385 WP_112103548.1 281730..283070(+) (rarA) [Haemophilus influenzae strain GA81666]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMIFWGPPGTGKTTLAEIIAQCINAEVER
IFAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQILQQAIEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLSVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYSAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=949898 ACHWYH_RS01385 WP_112103548.1 281730..283070(+) (rarA) [Haemophilus influenzae strain GA81666]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCAGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGCCATATTCATTCTATGA
TTTTCTGGGGGCCTCCAGGTACGGGAAAAACAACGCTCGCAGAGATTATTGCACAATGTATTAATGCAGAAGTAGAGCGA
ATTTTTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAATTTTGCAGCAAGCTATAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCGCGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGCGG
TTCTGCTCCAGACGCTGCATTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGAGAGCGAGCCATCGCCCAAGCCATTATCTATCTTTCGGTAGCACCAAAAAGTAATGC
CGTTTATACGGCGTTTAACACAGCAAAACAGCAAGCGAAAGATTTACCCGATTACGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATAGTGCAGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCAGCT
GGTGAAAATTATTTCCCGCCTGAATTAAAAGACACTCAATATTATTTTCCAACAAATAGAGGTATGGAAATTCAGATCAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTAAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	94.843	0.368