Detailed information NTG0949867

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACHWYG_RS06830
• Genome accession: NZ_CP172082
• Coordinates: 1356124..1357122 (+)
• Length: 332 a.a.
• NCBI ID: WP_032824019.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain GA54827
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1351124..1362122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHWYG_RS06805	rbsD	1351282..1351701 (+)	420	WP_005664526.1	D-ribose pyranase	-
ACHWYG_RS06810	rbsA	1351715..1353196 (+)	1482	WP_032824017.1	ribose ABC transporter ATP-binding protein RbsA	-
ACHWYG_RS06815	rbsC	1353212..1354180 (+)	969	WP_005664522.1	ribose ABC transporter permease	-
ACHWYG_RS06820	rbsB	1354200..1355078 (+)	879	WP_011961659.1	ribose ABC transporter substrate-binding protein RbsB	-
ACHWYG_RS06825	rbsK	1355176..1356096 (+)	921	WP_032824018.1	ribokinase	-
ACHWYG_RS06830	cytR	1356124..1357122 (+)	999	WP_032824019.1	substrate-binding domain-containing protein	Regulator
ACHWYG_RS06835	-	1357228..1357779 (+)	552	WP_006995184.1	TIGR00645 family protein	-
ACHWYG_RS06840	rraA	1357919..1358407 (-)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
ACHWYG_RS06845	menA	1358459..1359370 (-)	912	WP_032824020.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
ACHWYG_RS06850	tsaA	1359432..1360151 (+)	720	WP_005649451.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
ACHWYG_RS06855	tehA	1360204..1361148 (-)	945	WP_032824021.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36793.56 Da
• Isoelectric Point: 7.9562

>NTDB_id=949867 ACHWYG_RS06830 WP_032824019.1 1356124..1357122(+) (cytR) [Haemophilus influenzae strain GA54827]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSV
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRLTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=949867 ACHWYG_RS06830 WP_032824019.1 1356124..1357122(+) (cytR) [Haemophilus influenzae strain GA54827]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGTA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGGCATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCTAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATATCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCA
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.585	98.795	0.361