Detailed information NTG0948957

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: WDR10_RS08925
• Genome accession: NZ_CP147847
• Coordinates: 1807160..1809625 (-)
• Length: 821 a.a.
• NCBI ID: WP_338838009.1
• Uniprot ID: -
• Organism: Kurthia gibsonii strain ND2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1802160..1814625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDR10_RS08905 (WDR10_08905)	ruvX	1802305..1802724 (-)	420	WP_068452475.1	Holliday junction resolvase RuvX	-
WDR10_RS08910 (WDR10_08910)	-	1802724..1802993 (-)	270	WP_068452472.1	IreB family regulatory phosphoprotein	-
WDR10_RS08915 (WDR10_08915)	alaS	1803258..1805915 (-)	2658	WP_068452469.1	alanine--tRNA ligase	-
WDR10_RS08920 (WDR10_08920)	-	1806266..1807051 (-)	786	WP_285215198.1	GNAT family N-acetyltransferase	-
WDR10_RS08925 (WDR10_08925)	recD2	1807160..1809625 (-)	2466	WP_338838009.1	ATP-dependent RecD-like DNA helicase	Machinery gene
WDR10_RS08930 (WDR10_08930)	-	1809643..1810308 (-)	666	WP_285215200.1	tetratricopeptide repeat protein	-
WDR10_RS08935 (WDR10_08935)	mnmA	1810325..1811446 (-)	1122	WP_285215201.1	tRNA 2-thiouridine(34) synthase MnmA	-
WDR10_RS08940 (WDR10_08940)	-	1811465..1812610 (-)	1146	WP_285215202.1	cysteine desulfurase family protein	-
WDR10_RS08945 (WDR10_08945)	-	1812625..1813044 (-)	420	WP_068452451.1	Rrf2 family transcriptional regulator	-
WDR10_RS08950 (WDR10_08950)	-	1813176..1814462 (+)	1287	WP_338838010.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 821 a.a.
• Molecular weight: 91404.46 Da
• Isoelectric Point: 4.6503

>NTDB_id=948957 WDR10_RS08925 WP_338838009.1 1807160..1809625(-) (recD2) [Kurthia gibsonii strain ND2]
MTENLSLFANEPFFVVGRPVVSIFHNAENLFSIVKVKIQETNTDYQEKEVIVAGYFPKVVEDALYRFTGRMTTHPKYGTQ
FKAETFEKEIPATEAGVISYLSSDLFPGIGQRTAKIIVDQLGADAIKVIIQDPSSLDGIPRLNEEKKETLRLVLQQNLGM
DRIMIKLGEWGFGAQLAIKIYQLYLDDTLQLLQENPYRLIQDVEGVGFQRADDLGAILGIEGKHPDRIEAAVLHIINQAS
ISEGHTYVSAEQVIPQAKALLEQSQPIQLTYEEISQAIIRLGENGQLCGEETRLYLPSLYYSEVGIASKILQLKEKNEQQ
SAFPLSEIRTWIGDAEERFGVTYATTQIHAIETAINSAVMILTGGPGTGKTTVVRGIVDVFAELHGLSLDPKEYSKKDEE
FPIILVAPTGRAAKRLSESTGLPAQTIHRLLGFNGQDKDEETEREIGGKLIIVDEMSMVDTWLAHQLLRALNDHCQIVFV
GDQDQLPPVGPGQVLKDLLASKAIPTVELTDVYRQADGSSIIELAHQMKMGEQPTNLTEKTKDRSFIPAYTNQVASVVQQ
VIGSALKKGFSIHDVQVLAPMYRGDAGIDALNKMIQEFVNPKKNAKTKEIVFGDTTYRIGDKVLQLVNQPNSNVFNGDMG
EIISILKAKETTEKQDVVIVSFDGIEVTYERSDLNQITLAYCCSIHKSQGSEFPMVIMPVVRSYAKMLRKNLLYTGLTRA
KNFLILCGEPDTFLRGIQNDADVLRQTTLAMRLGETSEQIAEKEATEQKVGVEETNDEMIQRNTFVLTMDNFMDISPMIG
MDGCKPSDFLIEVQQELLENE

Nucleotide

• Length: 2466 bp

>NTDB_id=948957 WDR10_RS08925 WP_338838009.1 1807160..1809625(-) (recD2) [Kurthia gibsonii strain ND2]
TTGACTGAAAATCTTTCACTATTTGCGAATGAACCATTTTTCGTAGTAGGTCGACCTGTCGTCTCTATTTTTCATAATGC
AGAAAATTTATTTTCAATTGTGAAAGTGAAAATTCAAGAGACGAATACAGATTACCAAGAAAAAGAAGTGATTGTCGCTG
GATATTTTCCAAAGGTAGTAGAGGATGCGCTCTATCGTTTTACAGGGCGTATGACAACCCATCCGAAATACGGCACACAA
TTCAAAGCAGAAACATTTGAAAAAGAGATTCCTGCAACTGAAGCAGGTGTCATCTCGTATTTATCAAGTGATTTATTCCC
AGGAATCGGACAACGAACAGCAAAAATCATTGTCGATCAATTGGGAGCGGATGCAATTAAGGTCATCATTCAAGATCCTT
CATCTTTGGATGGTATTCCGCGTTTAAATGAAGAAAAGAAAGAGACATTGCGACTTGTACTCCAACAAAATCTAGGGATG
GACCGTATTATGATTAAATTAGGCGAATGGGGTTTTGGCGCACAATTAGCAATCAAAATCTATCAGCTCTATTTAGATGA
TACACTTCAACTCTTACAAGAAAATCCGTACCGACTCATTCAAGATGTAGAAGGAGTGGGTTTTCAGCGTGCAGATGATT
TAGGCGCTATTTTAGGAATTGAAGGAAAGCATCCAGACCGTATTGAAGCAGCAGTGTTACATATTATTAATCAAGCATCG
ATTTCAGAAGGACATACCTATGTCTCTGCTGAACAGGTTATTCCACAAGCAAAAGCTCTTTTGGAACAAAGTCAGCCTAT
CCAACTCACTTACGAAGAGATTTCACAAGCGATTATTCGTCTTGGTGAAAATGGACAGTTGTGTGGTGAGGAGACACGTC
TCTATTTACCATCTCTTTATTATTCAGAGGTGGGGATTGCGTCAAAGATTTTGCAGTTAAAAGAGAAGAATGAACAACAA
TCAGCATTTCCGCTTTCTGAAATTCGCACATGGATTGGTGACGCAGAGGAACGCTTTGGTGTGACCTATGCAACGACACA
AATCCATGCAATTGAGACAGCTATTAATAGTGCGGTTATGATTTTAACAGGGGGACCAGGTACAGGGAAAACAACCGTTG
TACGTGGGATTGTTGATGTATTTGCAGAGTTACATGGATTATCACTTGATCCGAAAGAATATAGTAAAAAAGACGAAGAA
TTCCCCATTATTCTTGTTGCACCAACAGGTCGTGCCGCGAAGCGTTTAAGTGAATCGACAGGCTTACCTGCACAGACGAT
TCACCGTCTACTTGGCTTTAATGGACAAGATAAAGACGAAGAAACAGAACGAGAAATCGGTGGTAAATTAATTATTGTCG
ATGAGATGTCGATGGTTGATACGTGGCTCGCACATCAATTACTACGTGCATTAAATGACCACTGTCAAATTGTATTCGTT
GGTGACCAAGATCAGCTACCGCCTGTAGGTCCGGGGCAAGTGCTAAAAGATTTACTCGCTTCAAAAGCGATTCCAACGGT
CGAATTAACCGATGTGTATCGTCAAGCAGATGGCTCGTCTATTATTGAGTTGGCGCATCAGATGAAAATGGGAGAGCAAC
CGACGAATTTAACCGAGAAAACAAAAGACCGCTCCTTTATCCCTGCCTATACGAATCAAGTTGCGAGCGTCGTTCAACAA
GTGATTGGTTCCGCGCTTAAAAAAGGATTCTCAATTCACGATGTCCAAGTACTAGCGCCGATGTATAGAGGAGATGCCGG
AATTGATGCATTGAACAAAATGATTCAAGAGTTTGTCAATCCGAAAAAGAATGCGAAGACGAAAGAGATTGTCTTTGGTG
ACACAACGTACCGTATTGGCGACAAAGTGTTGCAACTTGTCAATCAGCCGAATAGTAATGTCTTTAATGGGGATATGGGC
GAAATTATTTCGATTTTAAAAGCGAAAGAGACGACGGAAAAACAAGACGTTGTCATCGTGTCATTTGATGGTATTGAAGT
AACGTATGAACGCTCCGATCTAAATCAAATTACACTTGCCTATTGTTGTTCGATTCATAAATCACAAGGTAGTGAGTTCC
CAATGGTCATCATGCCCGTTGTAAGAAGTTATGCCAAGATGTTACGAAAGAATCTTCTTTATACAGGTCTGACACGTGCG
AAAAACTTTTTGATTTTGTGCGGAGAACCCGATACATTTTTACGTGGTATTCAAAATGATGCAGATGTTTTAAGGCAGAC
AACACTTGCGATGCGCCTTGGTGAAACATCTGAACAAATTGCTGAAAAAGAAGCTACTGAACAAAAAGTAGGAGTAGAAG
AAACGAATGATGAGATGATTCAACGCAATACATTTGTTCTAACGATGGACAATTTTATGGACATCTCGCCAATGATTGGT
ATGGATGGTTGTAAACCAAGTGATTTTTTAATTGAAGTACAACAAGAGTTACTAGAAAATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• AAA domain (AAA_30) (343-548)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.144	98.782	0.525