Detailed information NTG0948899

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACG3JL_RS01015
• Genome accession: NZ_CP171737
• Coordinates: 178374..179645 (-)
• Length: 423 a.a.
• NCBI ID: WP_004235324.1
• Uniprot ID: A0ABN0IPV9
• Organism: Streptococcus parauberis strain DB-M18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 173374..184645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JL_RS00980 (ACG3JL_00980)	-	174476..174916 (+)	441	WP_004347079.1	PTS sugar transporter subunit IIA	-
ACG3JL_RS00985 (ACG3JL_00985)	-	174943..175437 (+)	495	WP_003103258.1	PTS sugar transporter subunit IIB	-
ACG3JL_RS00990 (ACG3JL_00990)	-	175452..176303 (+)	852	WP_003104340.1	PTS sugar transporter subunit IIC	-
ACG3JL_RS00995 (ACG3JL_00995)	-	176305..177138 (+)	834	WP_013794356.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
ACG3JL_RS01000 (ACG3JL_01000)	-	177156..177440 (+)	285	WP_003104963.1	hypothetical protein	-
ACG3JL_RS01015 (ACG3JL_01015)	rarA	178374..179645 (-)	1272	WP_004235324.1	replication-associated recombination protein A	Machinery gene
ACG3JL_RS01020 (ACG3JL_01020)	-	179638..180129 (-)	492	WP_004347042.1	GNAT family N-acetyltransferase	-
ACG3JL_RS01025 (ACG3JL_01025)	-	180263..180466 (-)	204	WP_003105608.1	cold-shock protein	-
ACG3JL_RS01035 (ACG3JL_01035)	-	182877..183229 (+)	353	Protein_188	site-specific integrase	-
ACG3JL_RS01040 (ACG3JL_01040)	-	183324..183794 (+)	471	WP_003104309.1	DUF3013 family protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46799.13 Da
• Isoelectric Point: 6.4398

>NTDB_id=948899 ACG3JL_RS01015 WP_004235324.1 178374..179645(-) (rarA) [Streptococcus parauberis strain DB-M18]
MPDNLALRLRPRTISEVIGQKHLVGEGKIIRRMVDANMLSSMILFGPPGIGKTSIASAIAGTTKYAFRTFNATVDTKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDIKEAVQ
AAISDHERGFEFEVKLDEDALDFITTATNGDLRSAYNSLDLAIMSTHPNKDGSRHVTLDTVENSLQRSYITMDKNGDGHF
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDAALSDLRKSGNLPIPRHLRDGHYSGSKELGNAQDYLYPHAYPEKWVKQQYLPDKIKNKNYFDP
NETGKYERALGANKERIDKLSDN

Nucleotide

• Length: 1272 bp

>NTDB_id=948899 ACG3JL_RS01015 WP_004235324.1 178374..179645(-) (rarA) [Streptococcus parauberis strain DB-M18]
ATGCCTGATAATTTAGCCTTACGGTTGCGTCCACGAACGATTTCCGAAGTCATTGGACAAAAGCACCTAGTCGGCGAAGG
CAAAATCATCCGCCGCATGGTTGATGCCAACATGTTATCTTCAATGATTCTCTTTGGACCTCCGGGAATTGGTAAAACCT
CCATAGCCAGTGCCATTGCTGGCACAACTAAGTATGCCTTTCGCACCTTTAATGCGACGGTTGACACCAAAAAACGGCTC
CAAGAAATCGCCGAAGAAGCTAAGTTCTCCGGCGGACTTGTTCTTTTGCTTGATGAAATTCACAGACTAGATAAAACCAA
GCAAGATTTCTTACTACCACTATTGGAAAATGGCAACATTATCATGATTGGGGCCACCACTGAAAATCCATTCTTCTCAG
TCACACCTGCCATCCGCAGCAGGGTTCAAATTTTCGAGCTAGAGCCACTTTCCAATCAAGATATCAAAGAGGCTGTTCAA
GCTGCTATCAGCGATCATGAGCGAGGTTTCGAGTTTGAGGTCAAACTAGACGAGGATGCCTTGGACTTCATCACAACAGC
CACCAATGGCGATTTACGGTCTGCCTATAATTCCTTAGACTTGGCCATTATGTCCACCCATCCTAACAAGGACGGAAGTC
GTCATGTGACGCTGGATACGGTTGAAAATAGCTTGCAGCGAAGCTATATTACCATGGATAAAAATGGGGACGGTCACTTT
GATGTCCTGTCTGCTCTGCAAAAATCGATTCGGGGGTCTGATGTCAACGCCAGCCTCCATTACGCCGCACGTTTAGTTGA
GGCCGGGGACCTACCTTCTTTGGCTCGCCGCTTGACCGTCATCGCTTATGAGGATATCGGCTTGGCCAATCCTGAGGCAC
AAATTCATACCGTCACAGCCCTTGATGCTGCGCAGAAAATCGGCTTCCCAGAAGCACGCATACTGATCGCTAATGTGGTT
ATTGACTTGGCCTTATCACCCAAATCTAATTCGGCCTATGTGGCCATGGATGCTGCACTTAGCGACCTTCGGAAATCAGG
TAACCTGCCAATTCCAAGGCATCTGCGCGATGGCCACTATTCTGGCAGCAAAGAACTTGGCAACGCCCAAGATTACCTCT
ATCCCCATGCCTATCCCGAGAAATGGGTTAAGCAACAATACTTGCCAGATAAGATTAAAAATAAAAACTATTTTGACCCA
AATGAAACTGGTAAGTATGAGAGGGCCCTCGGAGCCAATAAAGAAAGGATTGACAAACTTTCTGACAATTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.273	98.582	0.574