Detailed information NTG0948749

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACG3JM_RS05840
• Genome accession: NZ_CP171735
• Coordinates: 1168162..1170543 (-)
• Length: 793 a.a.
• NCBI ID: WP_162839403.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1163162..1175543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JM_RS05820 (ACG3JM_05820)	pknB	1163345..1165084 (-)	1740	WP_003107495.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator
ACG3JM_RS05825 (ACG3JM_05825)	-	1165084..1165824 (-)	741	WP_003102848.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
ACG3JM_RS05830 (ACG3JM_05830)	rsmB	1165862..1167184 (-)	1323	WP_003105444.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACG3JM_RS05835 (ACG3JM_05835)	fmt	1167174..1168109 (-)	936	WP_013794216.1	methionyl-tRNA formyltransferase	-
ACG3JM_RS05840 (ACG3JM_05840)	priA	1168162..1170543 (-)	2382	WP_162839403.1	primosomal protein N'	Machinery gene
ACG3JM_RS05845 (ACG3JM_05845)	rpoZ	1170593..1170910 (-)	318	WP_003102967.1	DNA-directed RNA polymerase subunit omega	-
ACG3JM_RS05850 (ACG3JM_05850)	gmk	1170935..1171561 (-)	627	WP_003106012.1	guanylate kinase	-
ACG3JM_RS05855 (ACG3JM_05855)	-	1171670..1173277 (-)	1608	WP_004234999.1	ribonuclease Y	-
ACG3JM_RS05860 (ACG3JM_05860)	-	1174639..1175121 (+)	483	WP_003105588.1	S-ribosylhomocysteine lyase	-
ACG3JM_RS05865 (ACG3JM_05865)	-	1175197..1175334 (-)	138	WP_003107500.1	hypothetical protein	-

Sequence

Protein

• Length: 793 a.a.
• Molecular weight: 90156.54 Da
• Isoelectric Point: 8.2451

>NTDB_id=948749 ACG3JM_RS05840 WP_162839403.1 1168162..1170543(-) (priA) [Streptococcus parauberis strain DB-M11]
MMRVAHIIVDIPLMQTDKPFSYAIPDQLIGLVELGSRVHVPFGKSNRLLQGFIVGFSNLDGDYKEISDLLDVDPVLNSEQ
LQLADSLRKTVFSYKITLLKAMLPNLLNSHYDKELQVTENTSLQERNLIFNHKSSVLMSQLTSDQEALALKAIKNGRIEM
TYLAKDKKTIKTVSYYKVNKQLLMASEISARAKKKLQLKDFLLSHSEDGKLSDLRKDYSSDVVKYFVSNHLIDSYEEAVN
RSDAYFEKVESSHFLKLNHQQETAVQEITQAIGKDSNPFLIEGITGSGKTEVYLHTIDRVLKMGKTAIVLVPEISLTPQM
TNRFISRFGKLVAIMHSGLSDGEKFDEWKKIKTGQARVVVGARSAIFAPLENIGAIIIDEEHESTYKQESNPRYHARDVA
LLRAKFHQAVLVLGSATPSIESRARASRGLYHFIELTQRANPLAKIPEVEVVDFRDYIGKQSLSNYTPYLLDKIKDRLQK
NEQVVLMLNRRGYSSFIMCRDCGYVDGCPNCDISLTLHMDTKSMNCHYCGFQKEIPRICPNCQSKSIRYYGTGTQKAYDE
LLEAIPEARILRMDVDTTRKKGSHEKILAQFGNHEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSEKTFQL
LTQVAGRAGRAEKPGEVLIQTYNPNHYAIQMAKNQDYEAFYTYEMGIRQKMAYPPYYFTVGITLSLKDEQELVIKSYQVM
SILNENLSDKIKILGPTPKPVARTHNLYHYQIIVKYRFENNLEETLNTILDWTQAKGNKDLKVIIDQEPQNFM

Nucleotide

• Length: 2382 bp

>NTDB_id=948749 ACG3JM_RS05840 WP_162839403.1 1168162..1170543(-) (priA) [Streptococcus parauberis strain DB-M11]
TTGATGAGAGTTGCCCATATAATTGTAGATATCCCTTTAATGCAAACGGATAAACCTTTTAGTTATGCAATACCGGACCA
ACTGATTGGACTGGTTGAACTAGGTTCCCGAGTACACGTACCGTTTGGGAAAAGTAATCGCTTGTTACAAGGCTTTATCG
TTGGTTTTTCTAACCTTGATGGAGACTATAAAGAGATAAGTGACTTACTGGATGTAGATCCAGTTCTAAATTCAGAACAG
TTACAACTTGCAGACTCTTTAAGAAAAACAGTTTTTTCTTATAAAATTACTCTCCTCAAAGCTATGCTTCCCAATCTTCT
AAATTCGCATTATGATAAAGAATTGCAAGTTACAGAAAATACAAGTTTGCAAGAAAGAAATCTTATTTTTAATCATAAAT
CAAGTGTCTTGATGTCACAATTAACTAGTGACCAAGAAGCGTTGGCACTTAAAGCAATCAAAAATGGTCGTATTGAAATG
ACCTATCTGGCTAAAGATAAAAAAACGATCAAAACAGTTTCCTATTATAAGGTAAACAAACAATTATTAATGGCTTCAGA
AATCTCAGCCCGTGCAAAAAAGAAATTGCAACTTAAAGATTTTCTATTAAGTCATTCAGAAGATGGCAAGTTAAGTGACT
TGCGTAAAGATTATTCGAGTGATGTGGTCAAATATTTTGTTAGCAATCACTTAATTGATTCATATGAGGAAGCTGTCAAT
CGAAGTGATGCTTATTTTGAAAAGGTTGAGTCTTCTCACTTTTTAAAGCTGAATCACCAACAGGAAACTGCTGTTCAAGA
GATTACTCAGGCTATTGGGAAAGATTCTAATCCTTTCCTAATTGAAGGAATTACGGGTTCAGGTAAAACGGAGGTATACT
TACATACAATTGATCGTGTCCTTAAAATGGGAAAAACAGCTATTGTCCTAGTTCCTGAGATATCTTTGACACCACAAATG
ACCAACCGATTTATTTCACGTTTTGGGAAACTGGTTGCTATTATGCACTCGGGCTTATCCGACGGCGAAAAGTTTGATGA
GTGGAAAAAAATCAAGACTGGCCAAGCACGAGTAGTTGTTGGTGCGCGCTCAGCTATTTTTGCACCCTTAGAAAATATCG
GGGCTATCATCATTGATGAGGAACATGAGTCAACTTATAAGCAAGAATCTAATCCACGCTACCATGCACGAGATGTGGCT
TTATTGAGGGCAAAATTCCATCAAGCTGTATTAGTTTTAGGATCTGCAACACCAAGTATCGAAAGTAGGGCTCGAGCTAG
TCGAGGCTTATACCATTTTATTGAATTGACGCAACGTGCCAATCCTTTGGCTAAAATTCCAGAAGTGGAAGTTGTTGATT
TTAGAGACTATATTGGTAAACAATCACTTAGTAACTACACGCCTTATTTGTTAGACAAAATTAAAGACCGTTTGCAAAAA
AATGAGCAGGTTGTTTTGATGCTTAATAGACGTGGTTATTCAAGCTTCATCATGTGTCGTGATTGTGGTTATGTTGATGG
TTGTCCAAATTGTGACATTTCTTTAACCCTTCATATGGACACAAAGTCTATGAATTGTCATTATTGTGGTTTCCAAAAGG
AAATTCCGAGAATTTGTCCAAATTGTCAAAGTAAGAGTATCCGCTATTATGGGACGGGTACACAAAAAGCTTACGATGAA
TTGCTAGAAGCGATTCCTGAAGCGCGGATCCTCCGAATGGATGTTGATACGACTCGTAAAAAAGGAAGCCATGAGAAAAT
TCTTGCGCAATTTGGAAATCATGAGGCTGATATCTTATTAGGTACTCAAATGATTGCTAAAGGTTTAGATTTTCCTAATG
TCACTTTAGTCGGTGTTTTAAATGCTGATACCTCTTTAAACTTGCCGGATTTTAGGTCTTCTGAGAAGACCTTTCAGTTG
TTGACACAGGTTGCAGGTCGTGCGGGACGGGCAGAAAAACCCGGTGAGGTTTTAATTCAAACTTATAATCCCAATCATTA
TGCCATCCAAATGGCTAAAAATCAGGATTATGAAGCATTTTATACTTATGAAATGGGCATTCGTCAAAAGATGGCTTATC
CACCATATTATTTTACAGTTGGTATAACCTTATCCTTGAAAGACGAACAAGAATTAGTTATAAAATCTTATCAAGTTATG
TCCATATTAAATGAAAACTTATCTGACAAAATTAAGATTTTAGGTCCTACACCTAAACCGGTCGCACGGACGCATAATTT
ATACCATTATCAAATAATTGTAAAATATCGTTTTGAGAATAATTTAGAAGAGACATTAAATACTATTCTAGATTGGACGC
AAGCAAAAGGAAATAAAGATTTAAAAGTGATTATTGACCAAGAACCGCAAAATTTCATGTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (567-651)

• Type III restriction enzyme, res subunit (ResIII) (255-419)

• Primosomal protein N C-terminal domain (PriA_C) (695-789)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (508-533)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-104)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.783	100	0.489