Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACG3JH_RS03260 Genome accession   NZ_CP171731
Coordinates   664600..666369 (-) Length   589 a.a.
NCBI ID   WP_004234263.1    Uniprot ID   A0ABP2T0A2
Organism   Streptococcus parauberis strain DB-M1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 659600..671369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JH_RS03235 (ACG3JH_03235) mvk 660349..661227 (-) 879 WP_013793853.1 mevalonate kinase -
  ACG3JH_RS03240 (ACG3JH_03240) - 661390..662418 (-) 1029 Protein_631 ABC transporter ATP-binding protein -
  ACG3JH_RS03245 (ACG3JH_03245) - 662424..662609 (+) 186 WP_045407205.1 hypothetical protein -
  ACG3JH_RS03250 (ACG3JH_03250) - 662647..663057 (-) 411 WP_013793849.1 peptide deformylase -
  ACG3JH_RS03255 (ACG3JH_03255) gdhA 663123..664469 (-) 1347 WP_003106603.1 NADP-specific glutamate dehydrogenase -
  ACG3JH_RS03260 (ACG3JH_03260) rcrQ 664600..666369 (-) 1770 WP_004234263.1 ABC transporter ATP-binding protein Regulator
  ACG3JH_RS03265 (ACG3JH_03265) rcrP 666369..668105 (-) 1737 WP_003102488.1 ABC transporter ATP-binding protein Regulator
  ACG3JH_RS03270 (ACG3JH_03270) - 668208..668681 (-) 474 WP_003105038.1 GNAT family N-acetyltransferase -
  ACG3JH_RS03275 (ACG3JH_03275) - 668685..670562 (-) 1878 WP_013793847.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66120.55 Da        Isoelectric Point: 5.9269

>NTDB_id=948321 ACG3JH_RS03260 WP_004234263.1 664600..666369(-) (rcrQ) [Streptococcus parauberis strain DB-M1]
MTEKHVFKRIWTYLRKYKTSLISAVLLKVVSALMSSLEPFVLGLAITEISNNLIEMAKGVEGAGINKSYIAFILFLYFIR
AVFFEIGSYGSNYFMTKAVQSGIKDLRQDLSHKINKIPVSYFDKHQFGDMLGRFTSDVETVSNALQQAFLQIVNAFLTIT
FAVIMALYINAPLASILIISVPLIYFSSQFVLKKSQPYFKEQAKVLGDMNGFVQENLSGFNILKLYGREDRSEEDFHAIT
DRLQEVGFKASFLSGIMMPVLHFISDSVYMIIALLAGLQVLAGKLAIGNMQAFVQYIWQISQPIQTITQLAPVLQSSKSS
LERIFTVLDETEDLSKENVSLTVPLTGQVSFNQVDFSYNDSKPLIKDFTLDVEPGEMIAIVGPTGAGKTTLINLLMRFYD
VKSGSITVDGMDIREISRQAYRQQFGMVLQDAWLFEGTIQENLQFGNLSATEDDIIQAAETANVDHFISTLPGGYQMMMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGSHYNLLEARGFYYDLYYSQFKTSN

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=948321 ACG3JH_RS03260 WP_004234263.1 664600..666369(-) (rcrQ) [Streptococcus parauberis strain DB-M1]
ATGACAGAAAAACATGTATTCAAAAGAATCTGGACTTATCTTAGGAAATATAAAACATCATTAATTTCAGCTGTCCTTTT
AAAAGTCGTTAGTGCCTTAATGAGTTCTTTAGAGCCTTTTGTCCTTGGTCTTGCTATTACAGAGATATCAAATAACCTCA
TTGAGATGGCTAAAGGAGTAGAAGGGGCAGGAATTAATAAATCTTATATTGCTTTTATCCTCTTCTTATATTTTATCCGT
GCTGTCTTTTTTGAAATCGGTTCATATGGCTCTAACTATTTTATGACCAAGGCTGTACAATCAGGGATAAAAGATTTACG
TCAGGACTTAAGTCATAAAATTAATAAAATTCCAGTTTCTTATTTTGATAAGCATCAATTTGGAGATATGTTGGGACGCT
TTACATCCGACGTAGAAACTGTCTCAAATGCTTTACAACAAGCCTTTTTGCAAATTGTTAATGCCTTCTTAACGATTACT
TTTGCAGTTATTATGGCCCTTTATATTAATGCGCCTTTGGCTTCAATTTTGATTATTAGCGTTCCTTTAATCTATTTTTC
TTCTCAATTTGTCTTGAAAAAATCACAACCCTACTTTAAGGAGCAAGCTAAAGTATTAGGGGATATGAATGGTTTTGTTC
AAGAGAATTTAAGCGGATTTAATATTCTTAAATTATATGGTCGCGAAGATCGATCTGAGGAAGACTTTCATGCCATCACA
GATCGCCTTCAAGAAGTTGGGTTCAAAGCAAGTTTCTTATCTGGGATTATGATGCCCGTATTGCATTTTATCTCTGACTC
GGTCTATATGATTATAGCCCTATTAGCCGGACTCCAAGTTTTGGCAGGAAAACTAGCTATTGGTAATATGCAGGCTTTTG
TTCAGTACATCTGGCAAATTAGTCAGCCGATTCAAACAATTACCCAATTAGCTCCCGTTCTTCAAAGTTCTAAATCATCA
CTCGAACGGATTTTTACGGTTCTTGATGAAACTGAAGATCTTTCTAAGGAAAATGTCTCACTAACAGTGCCCTTGACAGG
ACAAGTATCCTTTAATCAAGTTGACTTTTCCTATAATGATTCTAAGCCACTGATTAAAGATTTTACCTTAGACGTTGAAC
CTGGTGAAATGATTGCTATCGTTGGTCCGACTGGCGCTGGTAAAACAACTTTGATAAATCTTCTTATGCGTTTCTATGAT
GTTAAGAGTGGCTCAATTACTGTAGATGGGATGGATATTAGAGAGATTTCTAGGCAAGCCTATCGTCAGCAATTCGGGAT
GGTTTTACAGGATGCTTGGTTGTTTGAAGGGACTATTCAAGAGAATCTTCAATTTGGGAATTTGTCGGCGACAGAAGATG
ATATCATTCAAGCCGCTGAGACGGCCAACGTTGATCACTTTATTAGTACCTTACCTGGCGGTTATCAGATGATGATGAAC
CAGGAATCAAGCAATATTTCTCTGGGGCAAAAACAACTCTTAACTATTGCGCGTGCGCTGTTAGCAGATCCGAAAATACT
GATTTTGGACGAGGCTACCTCATCAGTCGATACCCGTTTAGAATTATTAATTCAAAAAGCGATGAAACGCTTGATGAAAG
GTAGAACAAGTTTTGTGATTGCTCACCGTTTATCAACGATTCAAGAAGCAGATAAGATACTAGTTCTAAAAGATGGCCAA
ATTATTGAACAAGGAAGTCATTACAATCTCCTAGAGGCTCGTGGATTTTATTATGATCTCTATTATAGCCAGTTCAAAAC
ATCCAATTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(22-303)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.517

99.83

0.424