Detailed information NTG0948296

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACG3JG_RS10260
• Genome accession: NZ_CP171730
• Coordinates: 2009421..2010692 (-)
• Length: 423 a.a.
• NCBI ID: WP_004235324.1
• Uniprot ID: A0ABN0IPV9
• Organism: Streptococcus parauberis strain DB-WT
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2004421..2015692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JG_RS10225 (ACG3JG_10225)	-	2005523..2005963 (+)	441	WP_004347079.1	PTS sugar transporter subunit IIA	-
ACG3JG_RS10230 (ACG3JG_10230)	-	2005990..2006484 (+)	495	WP_003103258.1	PTS sugar transporter subunit IIB	-
ACG3JG_RS10235 (ACG3JG_10235)	-	2006499..2007350 (+)	852	WP_003104340.1	PTS sugar transporter subunit IIC	-
ACG3JG_RS10240 (ACG3JG_10240)	-	2007352..2008185 (+)	834	WP_013794356.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
ACG3JG_RS10245 (ACG3JG_10245)	-	2008203..2008487 (+)	285	WP_003104963.1	hypothetical protein	-
ACG3JG_RS10260 (ACG3JG_10260)	rarA	2009421..2010692 (-)	1272	WP_004235324.1	replication-associated recombination protein A	Machinery gene
ACG3JG_RS10265 (ACG3JG_10265)	-	2010685..2011176 (-)	492	WP_004347042.1	GNAT family N-acetyltransferase	-
ACG3JG_RS10270 (ACG3JG_10270)	-	2011310..2011513 (-)	204	WP_003105608.1	cold-shock protein	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46799.13 Da
• Isoelectric Point: 6.4398

>NTDB_id=948296 ACG3JG_RS10260 WP_004235324.1 2009421..2010692(-) (rarA) [Streptococcus parauberis strain DB-WT]
MPDNLALRLRPRTISEVIGQKHLVGEGKIIRRMVDANMLSSMILFGPPGIGKTSIASAIAGTTKYAFRTFNATVDTKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDIKEAVQ
AAISDHERGFEFEVKLDEDALDFITTATNGDLRSAYNSLDLAIMSTHPNKDGSRHVTLDTVENSLQRSYITMDKNGDGHF
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDAALSDLRKSGNLPIPRHLRDGHYSGSKELGNAQDYLYPHAYPEKWVKQQYLPDKIKNKNYFDP
NETGKYERALGANKERIDKLSDN

Nucleotide

• Length: 1272 bp

>NTDB_id=948296 ACG3JG_RS10260 WP_004235324.1 2009421..2010692(-) (rarA) [Streptococcus parauberis strain DB-WT]
ATGCCTGATAATTTAGCCTTACGGTTGCGTCCACGAACGATTTCCGAAGTCATTGGACAAAAGCACCTAGTCGGCGAAGG
CAAAATCATCCGCCGCATGGTTGATGCCAACATGTTATCTTCAATGATTCTCTTTGGACCTCCGGGAATTGGTAAAACCT
CCATAGCCAGTGCCATTGCTGGCACAACTAAGTATGCCTTTCGCACCTTTAATGCGACGGTTGACACCAAAAAACGGCTC
CAAGAAATCGCCGAAGAAGCTAAGTTCTCCGGCGGACTTGTTCTTTTGCTTGATGAAATTCACAGACTAGATAAAACCAA
GCAAGATTTCTTACTACCACTATTGGAAAATGGCAACATTATCATGATTGGGGCCACCACTGAAAATCCATTCTTCTCAG
TCACACCTGCCATCCGCAGCAGGGTTCAAATTTTCGAGCTAGAGCCACTTTCCAATCAAGATATCAAAGAGGCTGTTCAA
GCTGCTATCAGCGATCATGAGCGAGGTTTCGAGTTTGAGGTCAAACTAGACGAGGATGCCTTGGACTTCATCACAACAGC
CACCAATGGCGATTTACGGTCTGCCTATAATTCCTTAGACTTGGCCATTATGTCCACCCATCCTAACAAGGACGGAAGTC
GTCATGTGACGCTGGATACGGTTGAAAATAGCTTGCAGCGAAGCTATATTACCATGGATAAAAATGGGGACGGTCACTTT
GATGTCCTGTCTGCTCTGCAAAAATCGATTCGGGGGTCTGATGTCAACGCCAGCCTCCATTACGCCGCACGTTTAGTTGA
GGCCGGGGACCTACCTTCTTTGGCTCGCCGCTTGACCGTCATCGCTTATGAGGATATCGGCTTGGCCAATCCTGAGGCAC
AAATTCATACCGTCACAGCCCTTGATGCTGCGCAGAAAATCGGCTTCCCAGAAGCACGCATACTGATCGCTAATGTGGTT
ATTGACTTGGCCTTATCACCCAAATCTAATTCGGCCTATGTGGCCATGGATGCTGCACTTAGCGACCTTCGGAAATCAGG
TAACCTGCCAATTCCAAGGCATCTGCGCGATGGCCACTATTCTGGCAGCAAAGAACTTGGCAACGCCCAAGATTACCTCT
ATCCCCATGCCTATCCCGAGAAATGGGTTAAGCAACAATACTTGCCAGATAAGATTAAAAATAAAAACTATTTTGACCCA
AATGAAACTGGTAAGTATGAGAGGGCCCTCGGAGCCAATAAAGAAAGGATTGACAAACTTTCTGACAATTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.273	98.582	0.574