Detailed information NTG0947879

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V7S31_RS13935
• Genome accession: NZ_CP147655
• Coordinates: 2862475..2864853 (-)
• Length: 792 a.a.
• NCBI ID: WP_058906208.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain M1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2857475..2869853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V7S31_RS13900	-	2858547..2859275 (+)	729	WP_014305489.1	amino acid ABC transporter ATP-binding protein	-
V7S31_RS13905	-	2859296..2860123 (+)	828	WP_338816405.1	transporter substrate-binding domain-containing protein	-
V7S31_RS13910	-	2860180..2860830 (+)	651	WP_338816406.1	amino acid ABC transporter permease	-
V7S31_RS13915	-	2860849..2861505 (+)	657	WP_058906207.1	amino acid ABC transporter permease	-
V7S31_RS13920	-	2861541..2861672 (-)	132	WP_003152741.1	YrzQ family protein	-
V7S31_RS13925	-	2861694..2861885 (-)	192	WP_003152738.1	hypothetical protein	-
V7S31_RS13930	-	2861898..2862356 (-)	459	WP_017418223.1	PRC-barrel domain-containing protein	-
V7S31_RS13935	recD2	2862475..2864853 (-)	2379	WP_058906208.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V7S31_RS13940	-	2864872..2865492 (-)	621	WP_088005508.1	tetratricopeptide repeat protein	-
V7S31_RS13945	mnmA	2865580..2866695 (-)	1116	WP_058906210.1	tRNA 2-thiouridine(34) synthase MnmA	-
V7S31_RS13950	-	2866732..2867871 (-)	1140	WP_058906211.1	cysteine desulfurase family protein	-
V7S31_RS13955	cymR	2867890..2868306 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
V7S31_RS13960	-	2868501..2869769 (+)	1269	WP_003152729.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88348.04 Da
• Isoelectric Point: 4.9490

>NTDB_id=947879 V7S31_RS13935 WP_058906208.1 2862475..2864853(-) (recD2) [Bacillus velezensis strain M1]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILADASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIIVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=947879 V7S31_RS13935 WP_058906208.1 2862475..2864853(-) (recD2) [Bacillus velezensis strain M1]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGGCTGATGCATCGGTGCTTT
ATGATGTGCCGAAAATGTCAAAAAAGAAAGCGGACAAACTGGCGGGAGAGCTGCAGCGGCATCAGGGTCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAG
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTACTGACCGGGGGACCGGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGAGTATCGCTTGACCCTGGTGATTATAAAAAAGATGAAGCATTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGAATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTTGGCTGGAATGGCGCTGAAGGCTTTACCTATAATGAAGATCAGCCGATTGAAGGAAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTATAGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTACGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGGCTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGACCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGGGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCGTACTGCTGTTCCATCCATAAGTCGCAGGGAAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACATCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATACG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.128	99.874	0.89