Detailed information NTG0944387

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V9W61_RS12425
• Genome accession: NZ_CP146761
• Coordinates: 2419671..2422055 (-)
• Length: 794 a.a.
• NCBI ID: WP_335352517.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain JJ1138
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2414671..2427055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9W61_RS12390 (V9W61_12390)	-	2415774..2416502 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
V9W61_RS12395 (V9W61_12395)	-	2416517..2417326 (+)	810	WP_041506818.1	transporter substrate-binding domain-containing protein	-
V9W61_RS12400 (V9W61_12400)	-	2417407..2418060 (+)	654	WP_335352518.1	amino acid ABC transporter permease	-
V9W61_RS12405 (V9W61_12405)	-	2418076..2418726 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
V9W61_RS12410 (V9W61_12410)	-	2418765..2418896 (-)	132	WP_008342695.1	YrzQ family protein	-
V9W61_RS12415 (V9W61_12415)	-	2418917..2419108 (-)	192	WP_003216308.1	hypothetical protein	-
V9W61_RS12420 (V9W61_12420)	-	2419122..2419580 (-)	459	WP_041506817.1	PRC-barrel domain-containing protein	-
V9W61_RS12425 (V9W61_12425)	recD2	2419671..2422055 (-)	2385	WP_335352517.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V9W61_RS12430 (V9W61_12430)	-	2422075..2422728 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
V9W61_RS12435 (V9W61_12435)	mnmA	2422790..2423908 (-)	1119	WP_041506814.1	tRNA 2-thiouridine(34) synthase MnmA	-
V9W61_RS12440 (V9W61_12440)	-	2424003..2425145 (-)	1143	WP_144679887.1	cysteine desulfurase family protein	-
V9W61_RS12445 (V9W61_12445)	-	2425164..2425583 (-)	420	WP_008342713.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88914.36 Da
• Isoelectric Point: 5.1035

>NTDB_id=944387 V9W61_RS12425 WP_335352517.1 2419671..2422055(-) (recD2) [Bacillus altitudinis strain JJ1138]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTEKGEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=944387 V9W61_RS12425 WP_335352517.1 2419671..2422055(-) (recD2) [Bacillus altitudinis strain JJ1138]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCTGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAGACAGCATCTGTCA
CAGGGTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACACTTCATCAAATTATGCGTGATC
CGTCTGTGTTATATGACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGA
CTTGAGCAAATCATGATTAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGTTGCAAAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACGTACATACAAACGAAAGATCTGATTGTCGAGACCCGTAAACTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAGGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAACTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TATTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCGCAAAAGGGTTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTTGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTAAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGGGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACATCTTTAACCATGCGTCTTACTGAAAAGGGAGAAATCATGGACGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80	100	0.801