Detailed information NTG0944136

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOD_RS05855
• Genome accession: NZ_CP170429
• Coordinates: 1119187..1120461 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t1531
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1114187..1125461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOD_RS05830	hisS	1114748..1116010 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
ACFIOD_RS05835	aspS	1116026..1117792 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
ACFIOD_RS05845	-	1118125..1118253 (+)	129	WP_001790559.1	hypothetical protein	-
ACFIOD_RS05850	-	1118253..1119026 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
ACFIOD_RS05855	rarA	1119187..1120461 (-)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
ACFIOD_RS05860	cymR	1120546..1120968 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOD_RS05865	-	1121068..1121250 (+)	183	WP_000752909.1	CsbD family protein	-
ACFIOD_RS05870	-	1121290..1121436 (+)	147	WP_000009238.1	SAS049 family protein	-
ACFIOD_RS05875	-	1121673..1122686 (-)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
ACFIOD_RS05880	-	1122998..1124140 (+)	1143	WP_000409157.1	cysteine desulfurase family protein	-
ACFIOD_RS05885	mnmA	1124141..1125259 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=944136 ACFIOD_RS05855 WP_000102729.1 1119187..1120461(-) (rarA) [Staphylococcus aureus strain t1531]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=944136 ACFIOD_RS05855 WP_000102729.1 1119187..1120461(-) (rarA) [Staphylococcus aureus strain t1531]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684