Detailed information NTG0944114

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: V7A39_RS09150
• Genome accession: NZ_CP146749
• Coordinates: 1797912..1798847 (-)
• Length: 311 a.a.
• NCBI ID: WP_198493872.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain L3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1792912..1803847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V7A39_RS09125 (V7A39_09125)	-	1792957..1793817 (-)	861	WP_019292237.1	S1 RNA-binding domain-containing protein	-
V7A39_RS09130 (V7A39_09130)	frr	1793929..1794486 (-)	558	WP_017368646.1	ribosome recycling factor	-
V7A39_RS09135 (V7A39_09135)	pyrH	1794515..1795231 (-)	717	WP_019292238.1	UMP kinase	-
V7A39_RS09140 (V7A39_09140)	-	1795322..1796515 (-)	1194	WP_019292239.1	acetate kinase	-
V7A39_RS09145 (V7A39_09145)	-	1796634..1797827 (-)	1194	WP_019292240.1	acetate kinase	-
V7A39_RS09150 (V7A39_09150)	comYH	1797912..1798847 (-)	936	WP_198493872.1	class I SAM-dependent methyltransferase	Machinery gene
V7A39_RS09155 (V7A39_09155)	-	1798893..1799123 (-)	231	WP_003133314.1	DUF3165 family protein	-
V7A39_RS09160 (V7A39_09160)	typA	1799198..1801039 (-)	1842	WP_003133313.1	translational GTPase TypA	-
V7A39_RS09165 (V7A39_09165)	-	1801360..1801572 (+)	213	WP_003133311.1	YqgQ family protein	-
V7A39_RS09170 (V7A39_09170)	-	1801565..1802530 (+)	966	WP_003133309.1	ROK family glucokinase	-
V7A39_RS09175 (V7A39_09175)	-	1802550..1802930 (+)	381	WP_003133308.1	rhodanese-like domain-containing protein	-
V7A39_RS09180 (V7A39_09180)	-	1802970..1803416 (-)	447	WP_003133306.1	DNA starvation/stationary phase protection protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35081.10 Da
• Isoelectric Point: 4.6120

>NTDB_id=944114 V7A39_RS09150 WP_198493872.1 1797912..1798847(-) (comYH) [Lactococcus petauri strain L3]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRVLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQIDAVKPQPLEPVDVVMSDLPVGYYPDDETASHFQVHDKSEHTYVHHLMVEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=944114 V7A39_RS09150 WP_198493872.1 1797912..1798847(-) (comYH) [Lactococcus petauri strain L3]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTGGTTCTTGAAAATATTATGGCAATTCAAGCGGAGCTCTTGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAGTTTGCATCTCTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAGTGGCAAAAGCTGTTTCAATTTGTCTTGCTTCAAGGGTCACGTGTC
GCACCAATGCAAGCAAATCATAATTTAACACCAGATTCTATTGGGTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
AGAAAGAAAGATTCGTGTACTAGAATTTGGCTCAGGAACAGGGAATTTAGCGGAAACGCTCTTGGTTCATATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTGTCCGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATCGATGCCGTTAAACCACAGCCCTTGGAACCTGTGGATGTTGTGATGAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAACAGCCAGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCATTTAATGG
TTGAGCAATCTTTCAAATATCTGAAAGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCTGAGTTTTTGAAGGCTTGGATTAAAGAGCATGCGCATGTTGCTGCAGTTATTACATTACCTTCATCACTCTTTAAAGG
TGCAGGGAAATCAATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTTAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (133-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492