Detailed information NTG0942986

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOF_RS06005
• Genome accession: NZ_CP170397
• Coordinates: 1143829..1145103 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102736.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t3841
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1138829..1150103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOF_RS05980	hisS	1139390..1140652 (+)	1263	WP_000590824.1	histidine--tRNA ligase	-
ACFIOF_RS05985	aspS	1140668..1142434 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
ACFIOF_RS05995	-	1142767..1142895 (+)	129	WP_001808039.1	hypothetical protein	-
ACFIOF_RS06000	-	1142895..1143668 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
ACFIOF_RS06005	rarA	1143829..1145103 (-)	1275	WP_000102736.1	replication-associated recombination protein A	Machinery gene
ACFIOF_RS06010	cymR	1145188..1145610 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOF_RS06015	-	1145710..1145892 (+)	183	WP_000752909.1	CsbD family protein	-
ACFIOF_RS06020	-	1145932..1146078 (+)	147	WP_000009238.1	SAS049 family protein	-
ACFIOF_RS06025	-	1146314..1147327 (-)	1014	WP_000985886.1	LLM class flavin-dependent oxidoreductase	-
ACFIOF_RS06030	-	1147639..1148781 (+)	1143	WP_000409168.1	cysteine desulfurase family protein	-
ACFIOF_RS06035	mnmA	1148782..1149900 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47266.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=942986 ACFIOF_RS06005 WP_000102736.1 1143829..1145103(-) (rarA) [Staphylococcus aureus strain t3841]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSSMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=942986 ACFIOF_RS06005 WP_000102736.1 1143829..1145103(-) (rarA) [Staphylococcus aureus strain t3841]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCATCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTTAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	68.81	99.057	0.682