Detailed information NTG0942926

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOP_RS08085
• Genome accession: NZ_CP170392
• Coordinates: 1674475..1675749 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t442
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1669475..1680749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOP_RS08055	mnmA	1669677..1670795 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACFIOP_RS08060	-	1670796..1671938 (-)	1143	WP_103152286.1	cysteine desulfurase family protein	-
ACFIOP_RS08065	-	1672250..1673263 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
ACFIOP_RS08070	-	1673500..1673646 (-)	147	WP_000009238.1	SAS049 family protein	-
ACFIOP_RS08075	-	1673686..1673868 (-)	183	WP_000752909.1	CsbD family protein	-
ACFIOP_RS08080	cymR	1673968..1674390 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOP_RS08085	rarA	1674475..1675749 (+)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
ACFIOP_RS08090	-	1675910..1676683 (-)	774	WP_410540655.1	ThiF family adenylyltransferase	-
ACFIOP_RS08095	-	1676683..1676811 (-)	129	WP_001790559.1	hypothetical protein	-
ACFIOP_RS08105	aspS	1677144..1678910 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
ACFIOP_RS08110	hisS	1678926..1680188 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=942926 ACFIOP_RS08085 WP_000102729.1 1674475..1675749(+) (rarA) [Staphylococcus aureus strain t442]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=942926 ACFIOP_RS08085 WP_000102729.1 1674475..1675749(+) (rarA) [Staphylococcus aureus strain t442]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684