Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   V8V48_RS04805 Genome accession   NZ_CP146481
Coordinates   1029504..1030547 (+) Length   347 a.a.
NCBI ID   WP_029378980.1    Uniprot ID   -
Organism   Staphylococcus xylosus strain MS1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1024504..1035547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V8V48_RS04780 (V8V48_04780) - 1025460..1026182 (+) 723 WP_029378975.1 type 1 glutamine amidotransferase -
  V8V48_RS04785 (V8V48_04785) - 1026383..1027369 (-) 987 WP_029378976.1 FUSC family protein -
  V8V48_RS04790 (V8V48_04790) map 1027546..1028298 (+) 753 WP_029378977.1 type I methionyl aminopeptidase -
  V8V48_RS04795 (V8V48_04795) - 1028403..1028789 (+) 387 WP_326026239.1 hypothetical protein -
  V8V48_RS04800 (V8V48_04800) liaF 1028806..1029507 (+) 702 WP_029378979.1 cell wall-active antibiotics response protein LiaF -
  V8V48_RS04805 (V8V48_04805) vraS 1029504..1030547 (+) 1044 WP_029378980.1 sensor histidine kinase Regulator
  V8V48_RS04810 (V8V48_04810) vraR 1030537..1031166 (+) 630 WP_017723494.1 response regulator transcription factor Regulator
  V8V48_RS04815 (V8V48_04815) - 1031435..1032580 (-) 1146 WP_029378981.1 YihY/virulence factor BrkB family protein -
  V8V48_RS04820 (V8V48_04820) - 1032936..1033220 (-) 285 WP_029378982.1 hypothetical protein -
  V8V48_RS04825 (V8V48_04825) - 1033227..1033691 (-) 465 WP_326026237.1 low molecular weight protein-tyrosine-phosphatase -
  V8V48_RS04830 (V8V48_04830) - 1033826..1034029 (+) 204 WP_017723498.1 DUF1128 family protein -
  V8V48_RS04835 (V8V48_04835) - 1034047..1035309 (+) 1263 WP_411776024.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40071.57 Da        Isoelectric Point: 6.4215

>NTDB_id=942837 V8V48_RS04805 WP_029378980.1 1029504..1030547(+) (vraS) [Staphylococcus xylosus strain MS1]
MNHYIRAIGSMLILVYSTFFAIFFIDKVFVNVMYFQGMFYTQIFGIPVLLFLNLMVILLCIIVGSVLAYKINQQNHWLKD
QIERSIEGQTVGINDQNIELYNETIELYQTFVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVIHDI
EEFKVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNRDDYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDAGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=942837 V8V48_RS04805 WP_029378980.1 1029504..1030547(+) (vraS) [Staphylococcus xylosus strain MS1]
ATGAATCACTACATTAGAGCAATAGGTTCGATGTTGATATTAGTTTATAGTACATTTTTTGCTATATTTTTTATTGATAA
AGTATTTGTTAACGTAATGTACTTTCAAGGTATGTTTTATACCCAAATATTTGGTATACCCGTCTTATTATTTTTAAATT
TAATGGTTATTTTGCTCTGTATTATTGTAGGTTCTGTATTAGCTTATAAAATAAACCAACAAAATCATTGGTTAAAAGAC
CAAATAGAAAGATCAATAGAAGGGCAAACTGTAGGTATAAATGATCAAAATATAGAATTGTATAATGAAACCATTGAGTT
ATATCAAACGTTCGTCCCTTTAAATCAAGAAGTACATAAATTAAGGATGAAAACGCAAAATTTAACTAATGAATCATATA
ATATTAATGATGTAAAAGTGAAAAAAATTATTGAAGATGAACGACAAAGGCTAGCACGTGAATTACATGATTCAGTGAGT
CAGCAGTTGTTCGCAGCAAGCATGATGTTATCAGCAATAAAAGAAACAAAATTAGAGGCACCATTAGATCAGCAAATTCC
GGTACTAGAGAAAATGATTCAAGATTCTCAGCTAGAAATGAGAGCTTTATTACTACATTTAAGACCTATAGGATTGAAAG
ATAAATCACTTGGTGAAGGTATTAAAGACTTAGTTGTAGATCTACAGAAAAAAGTACCGATGAAAGTTATACATGATATA
GAAGAATTTAAAGTACCTAAAGGTATTGAAGATCATTTATTTAGAATCACACAAGAAGCTATATCGAATACATTAAGGCA
TTCAAAGGGAACTAAAGTAACTATAGAGTTATTTAATAGAGATGATTATTTATTATTGAGAATACAAGATAATGGTAAAG
GCTTTAATGTTGATGATAAAGTAGAACAAAGTTATGGCTTAAAAAATATGCGTGAGCGTGCACTTGAGATTGGTGCAACG
TTTCATATTGTGTCACTACCTGATGCAGGTACCAGAATTGAAGTTAAAGCCCCATTAAATAAGGAGGATTCATATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882