Detailed information NTG0942810

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACFIOJ_RS05785
• Genome accession: NZ_CP170391
• Coordinates: 1127493..1128767 (-)
• Length: 424 a.a.
• NCBI ID: WP_054190068.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t21642
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1122493..1133767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOJ_RS05760	hisS	1123009..1124271 (+)	1263	WP_054190070.1	histidine--tRNA ligase	-
ACFIOJ_RS05765	aspS	1124287..1126053 (+)	1767	WP_410533897.1	aspartate--tRNA ligase	-
ACFIOJ_RS05775	-	1126386..1126514 (+)	129	WP_001791215.1	hypothetical protein	-
ACFIOJ_RS05780	-	1126514..1127332 (+)	819	WP_410533899.1	ThiF family adenylyltransferase	-
ACFIOJ_RS05785	rarA	1127493..1128767 (-)	1275	WP_054190068.1	replication-associated recombination protein A	Machinery gene
ACFIOJ_RS05790	cymR	1128852..1129274 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
ACFIOJ_RS05795	-	1129374..1129556 (+)	183	WP_000752909.1	CsbD family protein	-
ACFIOJ_RS05800	-	1129596..1129742 (+)	147	WP_000009238.1	SAS049 family protein	-
ACFIOJ_RS05805	-	1129979..1130992 (-)	1014	WP_000985882.1	LLM class flavin-dependent oxidoreductase	-
ACFIOJ_RS05810	-	1131303..1132445 (+)	1143	WP_054190067.1	cysteine desulfurase family protein	-
ACFIOJ_RS05815	mnmA	1132446..1133564 (+)	1119	WP_410533901.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47268.83 Da
• Isoelectric Point: 8.3539

>NTDB_id=942810 ACFIOJ_RS05785 WP_054190068.1 1127493..1128767(-) (rarA) [Staphylococcus aureus strain t21642]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQTKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=942810 ACFIOJ_RS05785 WP_054190068.1 1127493..1128767(-) (rarA) [Staphylococcus aureus strain t21642]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATATTGTTATTAGATGAAATACATCGACTAGATAAAGC
CAAACAAGACTTTTTATTACCTCATTTAGAAAACGGTAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAAACCAAAATTGATGAAGATGCCATGACATACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAGTTAGCTGTATTAAGTGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCTGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGACCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (174-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686