Detailed information NTG0942747

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V6986_RS12155
• Genome accession: NZ_CP146358
• Coordinates: 2398190..2400574 (-)
• Length: 794 a.a.
• NCBI ID: WP_024423121.1
• Uniprot ID: -
• Organism: Bacillus safensis strain yw6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2393190..2405574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6986_RS12120 (V6986_12120)	-	2394210..2394938 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
V6986_RS12125 (V6986_12125)	-	2394952..2395761 (+)	810	WP_103131897.1	transporter substrate-binding domain-containing protein	-
V6986_RS12130 (V6986_12130)	-	2395839..2396492 (+)	654	WP_039180271.1	amino acid ABC transporter permease	-
V6986_RS12135 (V6986_12135)	-	2396508..2397158 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
V6986_RS12140 (V6986_12140)	-	2397241..2397372 (-)	132	WP_064497881.1	YrzQ family protein	-
V6986_RS12145 (V6986_12145)	-	2397393..2397584 (-)	192	WP_003216308.1	hypothetical protein	-
V6986_RS12150 (V6986_12150)	-	2397598..2398116 (-)	519	WP_052196552.1	PRC-barrel domain-containing protein	-
V6986_RS12155 (V6986_12155)	recD2	2398190..2400574 (-)	2385	WP_024423121.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6986_RS12160 (V6986_12160)	-	2400594..2401247 (-)	654	WP_025092425.1	tetratricopeptide repeat protein	-
V6986_RS12165 (V6986_12165)	mnmA	2401308..2402426 (-)	1119	WP_338591908.1	tRNA 2-thiouridine(34) synthase MnmA	-
V6986_RS12170 (V6986_12170)	-	2402521..2403663 (-)	1143	WP_338591910.1	cysteine desulfurase family protein	-
V6986_RS12175 (V6986_12175)	-	2403682..2404101 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.59 Da
• Isoelectric Point: 5.2068

>NTDB_id=942747 V6986_RS12155 WP_024423121.1 2398190..2400574(-) (recD2) [Bacillus safensis strain yw6]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=942747 V6986_RS12155 WP_024423121.1 2398190..2400574(-) (recD2) [Bacillus safensis strain yw6]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCCGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCACTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGAAAAAAGACGGCGGAAGAAATTGTGGGACAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTACGATGTACCGCGCTTATCCAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGA
CTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGCTGCAAAAGATTGAGGAAAATCCGTATCAGCTTGTTAAGGATGTTGAGGGGATCGGATTTATTAAGGCGGATG
AGCTCGGCGCTAGAACAGGCATCTCAGGTAATGATCCAGAGCGGATTCGTGCAGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTACGCGGAGCAAAGTGTTGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TACGCGGATCAATTTCCTGAATCAGAATTCCTGCTTGCACTTGGTGAGCTGGAGGAGCGATTAGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGTGGACCTGGTACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGGTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGTTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTACCATCAGTTGGACCAGGTCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACTATTGTTGAACTTGCCCATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAATGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGACATTCAAGTGCTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCATTTG
GTGATGTGGTGTACCGGACAGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATTTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCAGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACGAAAAAGGATTTTCATCAATTTACTCATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TCCCCATTGTTGTGCTGCCAGTTGTGAGGAGCTATTACCGAATGCTTCGGCGTAATTTGCTGTACACAGCGATTACACGA
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTTGTGCAAACCGAACAAATTATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798