Detailed information NTG0940842

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U70_RS04390
• Genome accession: NZ_CP145868
• Coordinates: 897405..898286 (+)
• Length: 293 a.a.
• NCBI ID: WP_048790587.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS12
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 892405..903286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U70_RS04365 (V6U70_04365)	-	892937..894358 (+)	1422	WP_175057564.1	DUF4832 domain-containing protein	-
V6U70_RS04370 (V6U70_04370)	galE	894373..895386 (+)	1014	WP_021144269.1	UDP-glucose 4-epimerase GalE	-
V6U70_RS04375 (V6U70_04375)	-	895578..895814 (+)	237	WP_002890830.1	DUF1146 family protein	-
V6U70_RS04380 (V6U70_04380)	murA	895882..897153 (+)	1272	WP_410532941.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U70_RS04385 (V6U70_04385)	-	897155..897343 (+)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
V6U70_RS04390 (V6U70_04390)	endA	897405..898286 (+)	882	WP_048790587.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U70_RS04395 (V6U70_04395)	-	898362..899012 (-)	651	WP_037601175.1	amino acid ABC transporter permease	-
V6U70_RS04400 (V6U70_04400)	-	899024..899722 (-)	699	WP_048790962.1	amino acid ABC transporter permease	-
V6U70_RS04405 (V6U70_04405)	-	899740..900573 (-)	834	WP_410532944.1	transporter substrate-binding domain-containing protein	-
V6U70_RS04410 (V6U70_04410)	-	900585..901352 (-)	768	WP_070476864.1	amino acid ABC transporter ATP-binding protein	-
V6U70_RS04415 (V6U70_04415)	-	901541..902191 (-)	651	WP_183137164.1	amino acid ABC transporter permease	-
V6U70_RS04420 (V6U70_04420)	-	902203..902901 (-)	699	WP_410532946.1	amino acid ABC transporter permease	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31518.14 Da
• Isoelectric Point: 10.2036

>NTDB_id=940842 V6U70_RS04390 WP_048790587.1 897405..898286(+) (endA) [Streptococcus salivarius strain KSS12]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSVKSNGSTNGKATPQEQLAESVMT
TSVKSQLGNSLEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=940842 V6U70_RS04390 WP_048790587.1 897405..898286(+) (endA) [Streptococcus salivarius strain KSS12]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGGACGAGCAATAAGCTATCGCCTAATAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGTTAAATCAAACGGTTCAACAAATGGAAAGGCTACGCCACAAGAGCAGCTTGCTGAGTCAGTGATGACT
ACCTCCGTCAAGAGTCAACTAGGAAACTCCTTAGAATGGAATGGGGCAGGGGCTTATATTGTTAATGGTAATAAGACTAA
TCTAAATGCTAAGGTTTCTAGCCAACCCTATGCCAATAACCAAGTCAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTATTAAGTAAGGCAACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCT
GCGGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGATAGAGGTCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCTACGGGACAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACCCTTATTTATGAAGGGGATAATCTCATTCCATCAGGCTCACATCTTGAAGCCAAGTCAGCTGATGGCTC
ACTTGAGTTCAATGTCTTTGTTCCAAATGTACAAGAAGGAATTACCCTAGATTATTATTCAGGAAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.542	86.348	0.618
endA	Streptococcus pneumoniae D39	71.542	86.348	0.618
endA	Streptococcus pneumoniae R6	71.542	86.348	0.618
endA	Streptococcus pneumoniae TIGR4	71.542	86.348	0.618