Detailed information NTG0940789

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U69_RS05590
• Genome accession: NZ_CP145867
• Coordinates: 1236212..1237093 (-)
• Length: 293 a.a.
• NCBI ID: WP_060972710.1
• Uniprot ID: A0AB37D9X2
• Organism: Streptococcus salivarius strain KSS10
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1231212..1242093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U69_RS05560 (V6U69_05560)	-	1231596..1232294 (+)	699	WP_084871397.1	amino acid ABC transporter permease	-
V6U69_RS05565 (V6U69_05565)	-	1232306..1232956 (+)	651	WP_037601175.1	amino acid ABC transporter permease	-
V6U69_RS05570 (V6U69_05570)	-	1233144..1233911 (+)	768	WP_002885036.1	amino acid ABC transporter ATP-binding protein	-
V6U69_RS05575 (V6U69_05575)	-	1233923..1234756 (+)	834	WP_004182612.1	transporter substrate-binding domain-containing protein	-
V6U69_RS05580 (V6U69_05580)	-	1234774..1235472 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
V6U69_RS05585 (V6U69_05585)	-	1235484..1236134 (+)	651	WP_037601175.1	amino acid ABC transporter permease	-
V6U69_RS05590 (V6U69_05590)	endA	1236212..1237093 (-)	882	WP_060972710.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U69_RS05595 (V6U69_05595)	-	1237155..1237343 (-)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
V6U69_RS05600 (V6U69_05600)	murA	1237345..1238616 (-)	1272	WP_060972709.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U69_RS05605 (V6U69_05605)	-	1238684..1238920 (-)	237	WP_013990686.1	DUF1146 family protein	-
V6U69_RS05610 (V6U69_05610)	galE	1239112..1240125 (-)	1014	WP_175063675.1	UDP-glucose 4-epimerase GalE	-
V6U69_RS05615 (V6U69_05615)	-	1240140..1241561 (-)	1422	WP_073686323.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31504.12 Da
• Isoelectric Point: 10.2036

>NTDB_id=940789 V6U69_RS05590 WP_060972710.1 1236212..1237093(-) (endA) [Streptococcus salivarius strain KSS10]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSVKSNGSTNGKATPQEQLAESVMT
SSVKSQLGNSIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=940789 V6U69_RS05590 WP_060972710.1 1236212..1237093(-) (endA) [Streptococcus salivarius strain KSS10]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTCTTGATTGCAGT
TTTAGGTTACATTGGGACGAGCAATAAGCTATCGCCTAATAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGTCAAATCAAACGGTTCAACAAATGGAAAGGCTACGCCACAGGAGCAGCTTGCTGAGTCAGTGATGACT
AGCTCCGTCAAGAGTCAACTAGGAAATTCCATAGAATGGAATGGGGCAGGGGCTTATATTGTTAATGGTAATAAAACTAA
TCTAAATGCTAAGGTTTCTAGCCAACCCTATGCCAATAACCAAGTCAAAACGGTTCAAGGACAAACGGTTCCAACAGTTG
CGAATGCCTTATTAAGTAAAGCAACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCT
GCGGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCACGCCGTAGATAGAGGTCATTTGTTAGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCTACGGGACAAAACTATTATGAAAGCCTGGTACGAAAGGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACCCTAATTTATGAAGGGGATAACCTCATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCTGATGGCTC
ACTTGAGTTCAATGTCTTTGTTCCAAATGTACAAGAAGGGATTACCCTAGATTATTATTCAGGAAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.146	86.348	0.614
endA	Streptococcus pneumoniae D39	71.146	86.348	0.614
endA	Streptococcus pneumoniae R6	71.146	86.348	0.614
endA	Streptococcus pneumoniae TIGR4	71.146	86.348	0.614