Detailed information NTG0940644

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U67_RS04580
• Genome accession: NZ_CP145865
• Coordinates: 937528..938409 (+)
• Length: 293 a.a.
• NCBI ID: WP_013990683.1
• Uniprot ID: A0AB33ZCG3
• Organism: Streptococcus salivarius strain KSS8
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 932528..943409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U67_RS04555 (V6U67_04555)	-	933060..934481 (+)	1422	WP_022496459.1	DUF4832 domain-containing protein	-
V6U67_RS04560 (V6U67_04560)	galE	934496..935509 (+)	1014	WP_021144269.1	UDP-glucose 4-epimerase GalE	-
V6U67_RS04565 (V6U67_04565)	-	935701..935937 (+)	237	WP_037603973.1	DUF1146 family protein	-
V6U67_RS04570 (V6U67_04570)	murA	936005..937276 (+)	1272	WP_002883499.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U67_RS04575 (V6U67_04575)	-	937278..937466 (+)	189	WP_022496462.1	DNA-directed RNA polymerase subunit beta	-
V6U67_RS04580 (V6U67_04580)	endA	937528..938409 (+)	882	WP_013990683.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U67_RS04585 (V6U67_04585)	-	938487..939137 (-)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U67_RS04590 (V6U67_04590)	-	939149..939847 (-)	699	WP_002886251.1	amino acid ABC transporter permease	-
V6U67_RS04595 (V6U67_04595)	-	939865..940698 (-)	834	WP_021146932.1	transporter substrate-binding domain-containing protein	-
V6U67_RS04600 (V6U67_04600)	-	940710..941477 (-)	768	WP_151405000.1	amino acid ABC transporter ATP-binding protein	-
V6U67_RS04605 (V6U67_04605)	-	941666..942316 (-)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U67_RS04610 (V6U67_04610)	-	942328..943026 (-)	699	WP_002886251.1	amino acid ABC transporter permease	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31476.06 Da
• Isoelectric Point: 10.2177

>NTDB_id=940644 V6U67_RS04580 WP_013990683.1 937528..938409(+) (endA) [Streptococcus salivarius strain KSS8]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSAKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=940644 V6U67_RS04580 WP_013990683.1 937528..938409(+) (endA) [Streptococcus salivarius strain KSS8]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTTTTGATTGCAGT
TTTAGGTTACATTGGAACGAGCAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGCCAAATCAAACGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAACTCGCAGAGACGGTGATGACC
AGCTCTGTCAAGAGTCAACTCGGAAACGCCATAGAATGGAATGGGGCTGGTGCCTATATTGTTAACGGTAATAAAACCAA
TCTTAATGCTAAGGTATCTAGCCAACCCTACGCTAATAACCAAGTTAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACTTCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGACCGAGGCCATTTGTTAGGTTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAACTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTGACCCTCATTTATGAAGGAGATAACCTCATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAATGTCTTCGTTCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGCAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.356	86.348	0.608
endA	Streptococcus pneumoniae D39	70.356	86.348	0.608
endA	Streptococcus pneumoniae R6	70.356	86.348	0.608
endA	Streptococcus pneumoniae TIGR4	70.356	86.348	0.608