Detailed information NTG0940586

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U66_RS06015
• Genome accession: NZ_CP145864
• Coordinates: 1321184..1322065 (-)
• Length: 293 a.a.
• NCBI ID: WP_138261870.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS7
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1316184..1327065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U66_RS05985 (V6U66_05970)	-	1316568..1317266 (+)	699	WP_045772066.1	amino acid ABC transporter permease	-
V6U66_RS05990 (V6U66_05975)	-	1317278..1317928 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U66_RS05995 (V6U66_05980)	-	1318115..1318882 (+)	768	WP_138261876.1	amino acid ABC transporter ATP-binding protein	-
V6U66_RS06000 (V6U66_05985)	-	1318894..1319727 (+)	834	WP_268691097.1	transporter substrate-binding domain-containing protein	-
V6U66_RS06005 (V6U66_05990)	-	1319745..1320443 (+)	699	WP_045772066.1	amino acid ABC transporter permease	-
V6U66_RS06010 (V6U66_05995)	-	1320455..1321105 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U66_RS06015 (V6U66_06000)	endA	1321184..1322065 (-)	882	WP_138261870.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U66_RS06020 (V6U66_06005)	-	1322127..1322315 (-)	189	WP_138261869.1	DNA-directed RNA polymerase subunit beta	-
V6U66_RS06025 (V6U66_06010)	murA	1322317..1323588 (-)	1272	WP_138261868.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U66_RS06030 (V6U66_06015)	-	1323656..1323892 (-)	237	WP_013990686.1	DUF1146 family protein	-
V6U66_RS06035 (V6U66_06020)	-	1324214..1325317 (-)	1104	WP_013990687.1	glycosyl hydrolase family 8	-
V6U66_RS06040 (V6U66_06025)	-	1325326..1326636 (-)	1311	WP_014633211.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31558.26 Da
• Isoelectric Point: 10.3968

>NTDB_id=940586 V6U66_RS06015 WP_138261870.1 1321184..1322065(-) (endA) [Streptococcus salivarius strain KSS7]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSVKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIKWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYRHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=940586 V6U66_RS06015 WP_138261870.1 1321184..1322065(-) (endA) [Streptococcus salivarius strain KSS7]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAACTAGTCTCGTTACTAATAGCAGTCTTGATTGCAGT
GTTAGGTTACATTGGAACGAGCAATAAGCTCTCACCTAATAATCCAATCAAACAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGTCAAATCAAACGGCTCAACAAGTGGGCAGTCAACGCCACAAGAGCAGCTCGCTGAGACGGTGATGACC
AGCTCCGTCAAGAGTCAACTAGGAAACGCCATAAAATGGAATGGGGCAGGGGCTTATATTGTTAACGGTAATAAAACCAA
CCTTAATGCTAAGGTATCTAGCCAACCCTACGCTAATAACCAAGTTAAAACGGTTCAAGGCCAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACATCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATCGCCATGCCGTAGACCGAGGTCATTTGTTAGGTTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCAACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAAGTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAATAAACGTGTCCGT
TATCGCGTCACCCTTATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAACGTCTTCGTGCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGTAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	69.96	86.348	0.604
endA	Streptococcus pneumoniae D39	69.96	86.348	0.604
endA	Streptococcus pneumoniae R6	69.96	86.348	0.604
endA	Streptococcus pneumoniae TIGR4	69.96	86.348	0.604