Detailed information NTG0940451

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U64_RS05535
• Genome accession: NZ_CP145862
• Coordinates: 1232208..1233089 (-)
• Length: 293 a.a.
• NCBI ID: WP_070655728.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS4
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1227208..1238089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U64_RS05505 (V6U64_05500)	-	1227593..1228291 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
V6U64_RS05510 (V6U64_05505)	-	1228303..1228953 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U64_RS05515 (V6U64_05510)	-	1229141..1229908 (+)	768	WP_037604317.1	amino acid ABC transporter ATP-binding protein	-
V6U64_RS05520 (V6U64_05515)	-	1229920..1230753 (+)	834	WP_195519893.1	transporter substrate-binding domain-containing protein	-
V6U64_RS05525 (V6U64_05520)	-	1230771..1231469 (+)	699	WP_211180912.1	amino acid ABC transporter permease	-
V6U64_RS05530 (V6U64_05525)	-	1231481..1232131 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U64_RS05535 (V6U64_05530)	endA	1232208..1233089 (-)	882	WP_070655728.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U64_RS05540 (V6U64_05535)	-	1233151..1233339 (-)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
V6U64_RS05545 (V6U64_05540)	murA	1233341..1234612 (-)	1272	WP_410536168.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U64_RS05550 (V6U64_05545)	-	1234680..1234916 (-)	237	WP_080610470.1	DUF1146 family protein	-
V6U64_RS05555 (V6U64_05550)	galE	1235108..1236121 (-)	1014	WP_080610469.1	UDP-glucose 4-epimerase GalE	-
V6U64_RS05560 (V6U64_05555)	-	1236136..1237557 (-)	1422	WP_080610468.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31514.16 Da
• Isoelectric Point: 10.2177

>NTDB_id=940451 V6U64_RS05535 WP_070655728.1 1232208..1233089(-) (endA) [Streptococcus salivarius strain KSS4]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKPNNSVKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=940451 V6U64_RS05535 WP_070655728.1 1232208..1233089(-) (endA) [Streptococcus salivarius strain KSS4]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTTTTGATTGCAGT
TTTAGGTTACATTGGAACGAGTAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAC
CCAATAACTCCGTCAAATCAAACGGCTCAACAAGTGGTCAGTCTACGCCACAAGAGCAGCTCGCTGAGACGGTGATGACT
AGCTCCGTCAAGAGTCAACTAGGAAACGCCATAGAATGGAATGGTGCTGGTGCCTATATTGTTAACGGTAATAAAACCAA
TCTTAATGCTAAGGTATCTAGCCAACCCTATGCTAATAACCAAGTTAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACATCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCGGGAGAGTATAGCCATGCTGTAGACCGAGGTCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTTAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAACTTCCACGGGCCAAAACTATTATGAAAGTCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACACTCATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAATGTCTTCGTTCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGCAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.5	81.911	0.594
endA	Streptococcus pneumoniae D39	72.5	81.911	0.594
endA	Streptococcus pneumoniae R6	72.5	81.911	0.594
endA	Streptococcus pneumoniae TIGR4	72.5	81.911	0.594