Detailed information NTG0940318

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: V6U62_RS05565
• Genome accession: NZ_CP145860
• Coordinates: 1233154..1234035 (-)
• Length: 293 a.a.
• NCBI ID: WP_195187562.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS2
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1228154..1239035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U62_RS05535 (V6U62_05525)	-	1228535..1229233 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
V6U62_RS05540 (V6U62_05530)	-	1229245..1229895 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U62_RS05545 (V6U62_05535)	-	1230087..1230854 (+)	768	WP_037611663.1	amino acid ABC transporter ATP-binding protein	-
V6U62_RS05550 (V6U62_05540)	-	1230866..1231699 (+)	834	WP_195519893.1	transporter substrate-binding domain-containing protein	-
V6U62_RS05555 (V6U62_05545)	-	1231717..1232415 (+)	699	WP_002886251.1	amino acid ABC transporter permease	-
V6U62_RS05560 (V6U62_05550)	-	1232427..1233077 (+)	651	WP_002886253.1	amino acid ABC transporter permease	-
V6U62_RS05565 (V6U62_05555)	endA	1233154..1234035 (-)	882	WP_195187562.1	DNA/RNA non-specific endonuclease	Machinery gene
V6U62_RS05570 (V6U62_05560)	-	1234097..1234285 (-)	189	WP_003097027.1	DNA-directed RNA polymerase subunit beta	-
V6U62_RS05575 (V6U62_05565)	murA	1234287..1235558 (-)	1272	WP_195187561.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
V6U62_RS05580 (V6U62_05570)	-	1235626..1235862 (-)	237	WP_195187560.1	DUF1146 family protein	-
V6U62_RS05585 (V6U62_05575)	galE	1236054..1237067 (-)	1014	WP_021144269.1	UDP-glucose 4-epimerase GalE	-
V6U62_RS05590 (V6U62_05580)	-	1237082..1238503 (-)	1422	WP_195187559.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31506.19 Da
• Isoelectric Point: 10.2703

>NTDB_id=940318 V6U62_RS05565 WP_195187562.1 1233154..1234035(-) (endA) [Streptococcus salivarius strain KSS2]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSAKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIEWNGAGAYIVNGNKTNLNAKVSSKPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVMVN

Nucleotide

• Length: 882 bp

>NTDB_id=940318 V6U62_RS05565 WP_195187562.1 1233154..1234035(-) (endA) [Streptococcus salivarius strain KSS2]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTTTTGATTGCAGT
TTTAGGTTACATTGGAACGAGTAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGCCAAATCAAACGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAACTCGCAGAGACGGTGATGACT
AGCTCTGTCAAGAGTCAACTAGGAAACGCCATAGAATGGAATGGGGCTGGTGCCTATATTGTTAACGGTAATAAAACCAA
TCTTAATGCTAAGGTATCTAGCAAACCCTATGCTAATAACCAAGTTAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCTTTGTTAAGTAAAGCGACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACATCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGACCGAGGCCATTTGTTGGGCTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAACTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TATCGCGTTACCCTAATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAATGTCTTCGTTCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGCAAAGTAATGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.356	86.348	0.608
endA	Streptococcus pneumoniae D39	70.356	86.348	0.608
endA	Streptococcus pneumoniae R6	70.356	86.348	0.608
endA	Streptococcus pneumoniae TIGR4	70.356	86.348	0.608