Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACE2AN_RS06810 Genome accession   NZ_CP169564
Coordinates   1344385..1345107 (-) Length   240 a.a.
NCBI ID   WP_025172244.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 6_2F1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339385..1350107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE2AN_RS06800 - 1341959..1343125 (-) 1167 WP_081528367.1 MalY/PatB family protein -
  ACE2AN_RS06805 - 1343133..1344227 (-) 1095 WP_000031966.1 cystathionine gamma-synthase -
  ACE2AN_RS06810 rcrP 1344385..1345107 (-) 723 WP_025172244.1 ABC transporter ATP-binding protein Regulator
  ACE2AN_RS06815 - 1345132..1346067 (-) 936 WP_044791662.1 ABC transporter ATP-binding protein -
  ACE2AN_RS06820 amiA 1346239..1348197 (-) 1959 WP_044811690.1 peptide ABC transporter substrate-binding protein Regulator
  ACE2AN_RS06825 - 1348401..1350023 (-) 1623 WP_000017793.1 polysaccharide biosynthesis protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27315.19 Da        Isoelectric Point: 5.2119

>NTDB_id=939581 ACE2AN_RS06810 WP_025172244.1 1344385..1345107(-) (rcrP) [Streptococcus pneumoniae strain 6_2F1]
MNFNHVYFGYDENRPVLKDITCSIFKGQKIAFVGPSGSGKSTIVRLLERFYKPLSGDILMEQSSIYDFNLKEWRSKIAWV
SQNNAVLSGSIRDNLCLGLNRLVTDDELMKVLDLVSLGDEIRSMKEGLDTEVGERGRFLSGGQSQRLQIARTYLKDAEIL
IFDESTANLDADSEYAIISILYSALKEKTVVIIAHRLSTVKDVDCIFFLEERKITGSGTHKELLENHERYARFVQEQMIE

Nucleotide


Download         Length: 723 bp        

>NTDB_id=939581 ACE2AN_RS06810 WP_025172244.1 1344385..1345107(-) (rcrP) [Streptococcus pneumoniae strain 6_2F1]
TTGAATTTTAACCATGTCTATTTTGGTTATGATGAAAATCGACCTGTCTTAAAGGATATTACTTGTTCAATTTTCAAGGG
GCAAAAAATTGCTTTTGTTGGACCATCTGGATCAGGAAAATCAACGATTGTGCGTTTGTTAGAGCGGTTTTATAAACCGC
TTTCAGGAGATATTCTAATGGAGCAATCAAGTATATATGATTTTAACTTAAAAGAATGGAGAAGTAAAATCGCTTGGGTT
TCACAAAATAATGCAGTCTTATCTGGCAGTATTCGTGACAATCTTTGTCTCGGTTTGAATCGCTTAGTAACTGATGATGA
ATTGATGAAAGTGCTAGACTTAGTATCACTAGGTGATGAGATTCGCTCCATGAAAGAGGGACTAGATACTGAAGTTGGTG
AACGCGGACGATTCTTGTCAGGGGGGCAAAGCCAAAGACTTCAAATAGCTAGAACCTACTTAAAAGATGCTGAAATTCTT
ATATTTGATGAATCCACTGCTAATCTTGATGCGGATTCTGAGTATGCGATTATCAGTATCCTCTATTCTGCATTAAAGGA
GAAGACGGTTGTGATTATAGCGCATCGTTTGTCAACGGTAAAAGATGTGGATTGTATTTTCTTCTTAGAGGAGAGGAAAA
TCACTGGCTCAGGAACTCATAAGGAACTACTGGAAAATCATGAGCGTTATGCTCGTTTTGTGCAGGAGCAAATGATAGAG
TGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-167)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

36.82

99.583

0.367