Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ACEY2B_RS03715 Genome accession   NZ_CP169315
Coordinates   722053..724383 (+) Length   776 a.a.
NCBI ID   WP_015426839.1    Uniprot ID   -
Organism   Lactococcus lactis strain IFLLLBEK1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 717053..729383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEY2B_RS03695 (ACEY2B_03695) - 717883..718971 (-) 1089 WP_042230537.1 Xaa-Pro peptidase family protein -
  ACEY2B_RS03700 (ACEY2B_03700) ccpA 719186..720184 (+) 999 WP_003129447.1 catabolite control protein A Regulator
  ACEY2B_RS03705 (ACEY2B_03705) - 720323..721288 (+) 966 WP_225513449.1 NAD(P)/FAD-dependent oxidoreductase -
  ACEY2B_RS03710 (ACEY2B_03710) - 721448..722008 (+) 561 WP_003129445.1 CvpA family protein -
  ACEY2B_RS03715 (ACEY2B_03715) mutS/mutS2 722053..724383 (+) 2331 WP_015426839.1 endonuclease MutS2 Machinery gene
  ACEY2B_RS03720 (ACEY2B_03720) trxA 724480..724794 (+) 315 WP_003129442.1 thioredoxin -
  ACEY2B_RS03725 (ACEY2B_03725) - 725038..725241 (+) 204 WP_010906074.1 DUF2969 domain-containing protein -
  ACEY2B_RS03735 (ACEY2B_03735) aroD 725504..726184 (+) 681 WP_015426838.1 type I 3-dehydroquinate dehydratase -
  ACEY2B_RS03740 (ACEY2B_03740) purB 726382..727677 (+) 1296 WP_015426837.1 adenylosuccinate lyase -
  ACEY2B_RS03745 (ACEY2B_03745) - 727811..728794 (+) 984 WP_015426836.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 776 a.a.        Molecular weight: 87226.08 Da        Isoelectric Point: 6.8396

>NTDB_id=939005 ACEY2B_RS03715 WP_015426839.1 722053..724383(+) (mutS/mutS2) [Lactococcus lactis strain IFLLLBEK1]
MNKKILQILEYDKVKEQFMNALTTAQGQQELKDLKPLTDKEKIQLLFDEVADFRLLTQENGLLNLGKTNDLTEILRRLEL
EASLSGKEFVEIKKVIQLGINIQRFFDEAENVETPSLAITLEKLVDLSALVKKLEIFDNAGSLYDNASLELMHIRASIKS
HQSEIRKIMQEMLTKNLSSLSENVITIRNDRQVLPVKAENKNKIAGVVHDMSASGQTLYIEPNAVVSLNNKLNQKRIEER
QEITRIYRELASQLKPYSFDIRQNAWLIGHIDFVRAKYLYLAANKATLPELTTDKDITLFAARHPLIEAKTVVANDIKFD
AGLNTIVITGPNTGGKTITLKTVGLLTILAQSGLPILAADGSRIHLFDDIFADIGDEQSIEQSLSTFSSHMTNIVHILAQ
ADENSLVLFDELGAGTDPKEGAALAIAILENLRERNVKTMASTHYPELKAYGVETQQVINASMEFNIDKMQPTYHLQLGV
PGRSNALEISRRLGLPETIISVASQQISDSEHDVNQMIEKLEEKTREVIESSRNIKKIERENQSLHKDLTKVYNQINRER
EFELEKAQKEAQEVVKKASLEAQEILKNLNDKAALKPHEIIAARKELEGLAPTIDFSKNKVLKKAKAQRGLKQGAEVNVT
SYGQRGKLIRLEKDGRWTVQMGSITTRLNEDEFEVIESPEQIQAKTKNVSKKVTSKVKAQLDLRGMRYEEAELELDNYID
QALLANLIQITIVHGIGTGVIREMVQKKLQKHRHIKSYEYAPINAGGSGATIAILK

Nucleotide


Download         Length: 2331 bp        

>NTDB_id=939005 ACEY2B_RS03715 WP_015426839.1 722053..724383(+) (mutS/mutS2) [Lactococcus lactis strain IFLLLBEK1]
ATGAATAAAAAAATTCTCCAAATATTGGAATATGATAAAGTCAAAGAACAGTTCATGAATGCTTTGACGACAGCGCAGGG
TCAACAAGAATTAAAAGATTTAAAACCTTTGACAGATAAGGAAAAAATTCAGCTCCTTTTTGATGAAGTTGCTGATTTTC
GCTTATTGACCCAAGAAAATGGCCTATTAAATTTAGGAAAAACAAATGATTTAACAGAAATACTCAGACGTCTAGAGCTT
GAAGCCAGTCTTTCAGGCAAGGAATTCGTTGAAATAAAAAAAGTGATTCAATTAGGAATTAATATTCAACGCTTTTTTGA
TGAAGCTGAAAATGTTGAAACACCTTCACTAGCTATTACTTTGGAAAAATTGGTTGATTTATCAGCATTAGTCAAAAAAT
TAGAAATTTTTGATAATGCGGGAAGTCTTTATGATAATGCCAGTCTCGAATTGATGCATATCCGTGCTTCAATCAAGAGT
CATCAATCAGAAATTCGGAAAATCATGCAGGAAATGCTGACCAAAAATCTCTCATCTTTGAGTGAAAATGTCATCACTAT
CCGAAATGACCGACAAGTGCTTCCTGTAAAAGCAGAAAACAAAAATAAAATTGCTGGTGTAGTTCATGATATGTCTGCTT
CAGGTCAAACGCTTTATATTGAACCAAATGCGGTTGTTTCATTAAATAATAAACTTAATCAAAAGAGAATTGAAGAACGC
CAAGAAATCACAAGAATTTATCGTGAGCTTGCTAGTCAATTAAAACCTTATAGCTTTGATATAAGACAAAATGCTTGGCT
GATTGGTCATATTGATTTTGTTCGTGCCAAGTATCTTTATTTAGCAGCGAATAAAGCGACACTTCCAGAATTAACAACCG
ATAAAGATATTACCCTTTTTGCAGCTCGTCATCCTTTGATTGAGGCAAAAACTGTTGTGGCAAATGATATCAAATTTGAT
GCAGGGCTCAATACGATTGTTATTACCGGTCCTAATACGGGTGGGAAGACCATTACTTTGAAAACAGTTGGTTTGTTGAC
AATATTGGCTCAATCAGGTCTGCCAATTTTAGCAGCTGATGGCAGTCGAATTCATCTTTTTGATGATATTTTTGCCGATA
TCGGTGATGAGCAATCCATTGAGCAAAGTTTATCAACTTTCTCAAGTCATATGACTAATATTGTTCATATTTTAGCTCAA
GCAGATGAAAATAGTTTGGTCTTATTTGATGAACTTGGGGCCGGAACTGATCCGAAAGAAGGAGCGGCTCTTGCTATTGC
CATACTGGAAAATTTACGTGAACGAAATGTGAAAACCATGGCAAGTACTCATTATCCTGAGTTAAAAGCTTATGGGGTCG
AAACGCAACAAGTAATCAATGCAAGTATGGAATTTAACATTGATAAAATGCAACCCACTTATCATTTGCAATTGGGAGTG
CCTGGACGTTCAAATGCCTTGGAGATTTCTAGAAGATTAGGTTTGCCAGAAACTATTATTTCAGTAGCCAGTCAACAAAT
TTCAGACAGTGAGCATGATGTCAATCAGATGATTGAAAAGTTGGAAGAAAAAACACGTGAAGTGATTGAAAGTTCAAGAA
ATATTAAAAAAATTGAACGAGAAAATCAAAGTTTACATAAAGATTTGACAAAAGTCTATAATCAAATTAATCGTGAGCGC
GAGTTTGAATTAGAAAAAGCACAAAAAGAAGCTCAAGAAGTCGTTAAAAAAGCGAGCCTTGAAGCGCAAGAAATTTTGAA
GAATCTCAATGATAAAGCAGCATTGAAACCACATGAAATTATTGCTGCTAGAAAAGAACTTGAAGGTTTGGCTCCAACCA
TTGATTTTTCTAAAAATAAGGTTTTGAAAAAAGCGAAAGCACAAAGAGGACTTAAGCAAGGGGCTGAAGTTAATGTCACT
TCTTATGGTCAGCGTGGTAAATTGATTCGTTTAGAAAAAGATGGACGTTGGACGGTTCAAATGGGTTCAATCACGACTCG
TTTAAATGAAGATGAATTTGAAGTGATTGAAAGTCCAGAACAAATTCAAGCCAAAACTAAAAATGTCAGCAAGAAGGTGA
CTTCTAAAGTCAAAGCTCAACTTGATTTACGCGGGATGCGTTATGAAGAAGCAGAACTGGAATTGGATAATTATATTGAT
CAAGCTCTACTTGCAAATTTGATTCAAATTACGATTGTTCATGGGATTGGAACGGGTGTTATTCGAGAAATGGTACAGAA
AAAACTTCAAAAACACCGTCATATTAAATCTTATGAATATGCACCAATTAATGCTGGTGGCTCTGGAGCAACGATTGCTA
TTTTGAAGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(634-672)

Smr domain (Smr)

(701-776)

MutS domain V (MutS_V)

(326-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

42.748

100

0.433