Detailed information NTG0093815

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ANSO36C_RS05730
• Genome accession: NZ_AP025732
• Coordinates: 1297478..1298584 (-)
• Length: 368 a.a.
• NCBI ID: WP_251958755.1
• Uniprot ID: -
• Organism: Nostoc cf. commune SO-36
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1292478..1303584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANSO36C_RS05710 (ANSO36C_11450)	-	1292770..1292961 (-)	192	WP_251958751.1	hypothetical protein	-
ANSO36C_RS05715 (ANSO36C_11460)	-	1293123..1295669 (-)	2547	WP_251958752.1	AMIN domain-containing protein	-
ANSO36C_RS05720 (ANSO36C_11470)	-	1295930..1296700 (-)	771	WP_251958753.1	pilus assembly protein PilO	-
ANSO36C_RS05725 (ANSO36C_11480)	-	1296697..1297473 (-)	777	WP_251958754.1	PilN domain-containing protein	-
ANSO36C_RS05730 (ANSO36C_11490)	pilM	1297478..1298584 (-)	1107	WP_251958755.1	type IV pilus assembly protein PilM	Machinery gene
ANSO36C_RS05735 (ANSO36C_11500)	-	1298737..1300041 (+)	1305	WP_251958756.1	ABC transporter substrate-binding protein	-
ANSO36C_RS05740 (ANSO36C_11510)	-	1300542..1301840 (-)	1299	WP_251958757.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
ANSO36C_RS05745 (ANSO36C_11520)	-	1301943..1302068 (-)	126	WP_069072075.1	photosystem II protein Y	-
ANSO36C_RS05750 (ANSO36C_11530)	-	1302286..1302813 (-)	528	WP_251958758.1	gamma carbonic anhydrase family protein	-
ANSO36C_RS05755 (ANSO36C_11540)	-	1303059..1303571 (+)	513	WP_251958759.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40536.60 Da
• Isoelectric Point: 4.4889

>NTDB_id=93815 ANSO36C_RS05730 WP_251958755.1 1297478..1298584(-) (pilM) [Nostoc cf. commune SO-36]
MVKSFKSLFGKSNKGVGIELAPERVNVVQLRKQRQGLKLETFTSVAVPEGIVTDGQITDPAAMAQLIQQALAESKIKTSR
VATGVPGRDSIVRIIPVPAELDDKELREMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVHVLLVATRKEITDTY
ISTFEQAGLQIDVLEINSFALIRNIREQLRQFGPQEAAVLVDIEFDSTEIAIIVNGVPQFSRTVPIGTYQMQTALARAMS
LPTSRDMELLHGMVIPQTPLDGGKTGVTEIDPGMAAILRVLAELTDELRRSIDFYLNQSENLEVAQIILAGPGGGLQQLD
EFFTQRLSLPTTQIDPIVALALEVDTDKFPQVQRSSLAIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=93815 ANSO36C_RS05730 WP_251958755.1 1297478..1298584(-) (pilM) [Nostoc cf. commune SO-36]
GTGGTAAAAAGCTTCAAAAGTCTGTTTGGCAAATCAAATAAAGGGGTCGGCATTGAACTTGCTCCCGAACGGGTAAATGT
AGTTCAGCTACGCAAACAGCGTCAAGGCTTGAAACTAGAAACCTTTACATCGGTAGCAGTTCCCGAAGGCATTGTTACCG
ATGGTCAAATCACCGACCCCGCAGCAATGGCGCAATTAATCCAGCAGGCGCTAGCTGAGAGCAAAATCAAAACTTCTCGC
GTTGCCACTGGTGTCCCAGGGCGAGATTCCATCGTTCGGATCATACCAGTGCCAGCAGAGTTGGATGACAAAGAACTGCG
AGAAATGGTGCTGAACCACGAAGCAGGTTTGTATTTACCCTATCCTCGTGAAGAGGCTGATGTAGATTATCAAAAACTTG
GGTATTTTGTAGATGAAGATGGCATTGAAAAGGTACACGTACTTTTAGTAGCCACCCGCAAGGAGATAACGGATACCTAT
ATAAGTACTTTCGAGCAGGCAGGATTACAAATTGATGTTTTAGAAATTAACAGTTTTGCTTTAATTCGGAATATTCGTGA
ACAATTACGACAATTTGGCCCGCAAGAAGCAGCAGTACTCGTTGATATCGAGTTCGATAGTACAGAAATTGCCATCATCG
TTAACGGAGTGCCGCAATTTTCGCGCACAGTTCCAATCGGGACTTATCAAATGCAAACTGCCTTAGCTAGGGCAATGAGC
TTACCCACATCACGAGATATGGAACTGTTACACGGCATGGTCATTCCCCAAACTCCCTTAGACGGCGGGAAAACTGGTGT
TACCGAAATTGATCCTGGTATGGCTGCCATATTGAGAGTATTGGCAGAATTAACAGATGAACTGCGCCGTTCCATCGATT
TTTACCTCAATCAAAGTGAAAATTTGGAGGTAGCGCAAATTATATTAGCTGGGCCTGGAGGTGGACTCCAACAGCTAGAT
GAGTTTTTTACCCAACGACTGAGTTTACCAACTACCCAAATAGATCCAATCGTAGCTCTGGCTTTGGAAGTTGACACTGA
TAAATTTCCACAGGTACAACGCTCTAGTTTAGCGATCGTACTCGGTCTAGGAATGCGGGAGGTGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (282-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	67.302	99.728	0.671