Detailed information NTG0937761

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V6C56_RS05690
• Genome accession: NZ_CP145208
• Coordinates: 1178581..1181031 (+)
• Length: 816 a.a.
• NCBI ID: WP_186334160.1
• Uniprot ID: -
• Organism: Staphylococcus capitis subsp. urealyticus strain Sc1516939
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1173581..1186031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6C56_RS05665 (V6C56_05665)	-	1174098..1174238 (+)	141	WP_002436115.1	SAS049 family protein	-
V6C56_RS05670 (V6C56_05670)	-	1174292..1175287 (-)	996	WP_367010031.1	LLM class flavin-dependent oxidoreductase	-
V6C56_RS05675 (V6C56_05675)	-	1175548..1176690 (+)	1143	WP_002436113.1	cysteine desulfurase family protein	-
V6C56_RS05680 (V6C56_05680)	mnmA	1176690..1177808 (+)	1119	WP_049427509.1	tRNA 2-thiouridine(34) synthase MnmA	-
V6C56_RS05685 (V6C56_05685)	-	1177911..1178579 (+)	669	WP_002470021.1	tetratricopeptide repeat protein	-
V6C56_RS05690 (V6C56_05690)	recD2	1178581..1181031 (+)	2451	WP_186334160.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6C56_RS05695 (V6C56_05695)	alaS	1181371..1184001 (+)	2631	WP_367010032.1	alanine--tRNA ligase	-
V6C56_RS05700 (V6C56_05700)	-	1184065..1184325 (+)	261	WP_002435994.1	IreB family regulatory phosphoprotein	-
V6C56_RS05705 (V6C56_05705)	ruvX	1184327..1184755 (+)	429	WP_002435990.1	Holliday junction resolvase RuvX	-
V6C56_RS05710 (V6C56_05710)	-	1184769..1185089 (+)	321	WP_002436074.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 816 a.a.
• Molecular weight: 91827.21 Da
• Isoelectric Point: 4.6342

>NTDB_id=937761 V6C56_RS05690 WP_186334160.1 1178581..1181031(+) (recD2) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
MSDPTLFDKSMIKGTVDAILFQNNDNFYTVLKVDTIETNESFDSMPTVVGFLPNVVEGDVYTFKGQIVDHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNALGENAINDILNNPEVLEKVPSLPKKKQKQIAEQISSNQESEKIM
IRLHDLGFGPKLSMAIYQFYMGDTLKILDENPYQLVYDIKGIGFNKADQLARNIGIAADSEERLKAGLLYTLEEECIKQG
HTYLPNSYVIESTQTMLNDSSEVVISTKMLEQKIEQLSEEKKLIQSEEQVSIPSLYYSELKSVQNLYRIQTNNKKLKEIE
QSDLQMHIGEIESLNQVNYATSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVVLA
APTGRASKRLQESTGLEAMTIHRLIGWNQETQPEDILDNEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQIVFVGDEDQ
LPSVGPGQVFKDLIDSKRIPRVNLTEVYRQQDGSSIVDLAHRMKVGEPIDITQRFHDRSFINCTSDQIPDVVDKVVKSAV
SKGYNMSDIQVLAPMYKGNAGIKRLNQVLQSILNPKEKDSREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
AKENALNKDVIVVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVLL
GDPQAFDIGLKTKGQERLTQLNHLLKSYFGDEQEVIGSSGHSSVNSTEKHDTTQTEEESATTDAPQNDIVLSETTIFKID
PMINMGEMTPYDFAEH

Nucleotide

• Length: 2451 bp

>NTDB_id=937761 V6C56_RS05690 WP_186334160.1 1178581..1181031(+) (recD2) [Staphylococcus capitis subsp. urealyticus strain Sc1516939]
ATGTCTGACCCTACACTTTTTGATAAATCAATGATCAAAGGTACTGTAGATGCTATATTATTTCAAAATAATGATAATTT
CTATACAGTTCTTAAAGTAGACACGATTGAAACGAATGAGTCCTTTGATAGCATGCCAACTGTTGTAGGGTTTCTTCCAA
ATGTAGTTGAAGGAGACGTCTATACGTTTAAAGGGCAAATTGTCGACCACCCACGTTATGGTAAACAATTAAAAGCTGAA
ACTTTTGAAAAGGAACTTCCACAAACCAAAGATGCAATTATTAGTTATTTATCTAGTGATTTATTTAAAGGAATAGGAAA
GAAAACTGCTCAAAATATTGTTAATGCATTAGGCGAGAATGCAATCAATGATATATTAAATAATCCTGAAGTGTTAGAAA
AAGTCCCTAGTTTACCTAAGAAAAAGCAAAAGCAGATTGCAGAACAAATAAGTTCGAATCAAGAATCAGAAAAAATAATG
ATTCGGTTACATGATTTAGGATTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATATGGGAGATACATTGAAAAT
ACTAGACGAAAATCCTTATCAACTCGTTTATGATATTAAAGGAATAGGTTTTAATAAAGCTGATCAATTAGCGCGAAACA
TTGGTATTGCAGCAGATTCTGAAGAGCGTTTGAAAGCAGGATTGCTTTATACACTTGAAGAAGAATGTATCAAACAAGGA
CATACATATTTGCCTAATTCATATGTGATTGAATCAACGCAAACTATGCTTAACGATAGCTCTGAAGTTGTAATTTCTAC
TAAAATGCTAGAGCAAAAGATTGAGCAACTCTCTGAAGAGAAAAAATTGATTCAAAGCGAAGAACAAGTTTCAATTCCAA
GTTTGTATTATTCGGAATTAAAGAGTGTTCAAAATCTTTATCGTATTCAAACTAATAATAAAAAGTTAAAAGAAATCGAA
CAATCAGATTTACAAATGCATATTGGTGAAATTGAGTCACTAAATCAAGTAAATTATGCAACTTCACAGAAAGAAGCTTT
AGAGACGGCAATCAATTCAAAAGTGATGCTTCTTACTGGTGGTCCCGGTACTGGTAAAACTACTGTCATTAAAGGCATCG
TAGAGCTTTATGCAGAAATACATGGATTATCATTAGATTATGATGATTACAACGAGGATGATTATCCAGTTGTACTTGCT
GCACCAACTGGACGCGCATCTAAAAGACTTCAGGAATCTACTGGATTAGAAGCAATGACAATTCACCGTTTAATAGGTTG
GAATCAAGAAACACAACCTGAAGATATTTTAGATAATGAAATTAATGCACGGCTTATCATTATAGATGAAATGTCTATGG
TAGATACATGGTTATTTCATCAATTTTTAAGTGCTGTTCCATTAGATGCTCAAATTGTATTTGTAGGCGATGAAGACCAA
CTCCCTTCAGTTGGACCGGGTCAAGTGTTTAAAGACCTCATTGATTCTAAAAGAATTCCGCGTGTTAATCTTACGGAAGT
GTATCGCCAACAGGATGGCTCAAGTATTGTTGATTTAGCACATCGTATGAAAGTAGGCGAACCCATAGATATAACTCAAC
GTTTTCACGATCGCAGTTTCATTAACTGTACTTCAGACCAAATACCTGATGTAGTAGATAAAGTTGTTAAAAGTGCAGTG
AGTAAAGGGTATAATATGAGTGATATTCAAGTCCTTGCTCCTATGTATAAAGGTAATGCAGGAATAAAACGTCTCAATCA
AGTATTACAATCTATTTTAAATCCAAAGGAAAAAGATAGTCGTGAAATTGAATTCGGAGATGTTGTATTTCGTAAAGGAG
ATAAAGTACTTCAGTTGGTCAATAGACCTAATGACAATATATTTAATGGTGATATTGGTGTAATTGTAGGCATATTTTGG
GCTAAAGAAAATGCTCTTAATAAAGATGTAATAGTAGTAGATTTTGAAGGAAATGAAATTACCTTTACTCGACAAGACTT
ACTTGAACTTACTCATGCTTATTGTACATCTATTCATAAATCTCAAGGGTCAGAATTTCCAATTGTTATTATGCCTATAG
TTAAACAATACTTTCGTATGTTACAAAGACCTATCCTTTATACGGGTCTGACCCGTGCTAAGCAATCACTTGTTTTACTT
GGGGATCCCCAAGCATTTGATATAGGACTGAAGACAAAAGGCCAAGAACGTTTAACTCAGTTGAATCACTTATTAAAATC
TTATTTTGGTGATGAGCAAGAAGTTATAGGTAGTTCAGGTCATTCATCTGTAAATAGCACTGAAAAACATGATACTACAC
AAACTGAAGAAGAGAGCGCAACAACTGACGCACCACAAAATGACATTGTTCTTAGTGAAACCACTATATTTAAAATTGAT
CCTATGATTAATATGGGAGAAATGACGCCTTACGATTTTGCCGAGCATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.14	99.755	0.49