Detailed information NTG0937725

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V6C60_RS06755
• Genome accession: NZ_CP145206
• Coordinates: 1352868..1355318 (+)
• Length: 816 a.a.
• NCBI ID: WP_047796354.1
• Uniprot ID: -
• Organism: Staphylococcus capitis subsp. urealyticus strain Sc1516941
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1347868..1360318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6C60_RS06730 (V6C60_06720)	-	1348383..1348523 (+)	141	WP_002436115.1	SAS049 family protein	-
V6C60_RS06735 (V6C60_06725)	-	1348579..1349574 (-)	996	WP_047796358.1	LLM class flavin-dependent oxidoreductase	-
V6C60_RS06740 (V6C60_06730)	-	1349835..1350977 (+)	1143	WP_047796357.1	cysteine desulfurase family protein	-
V6C60_RS06745 (V6C60_06735)	mnmA	1350977..1352095 (+)	1119	WP_047796356.1	tRNA 2-thiouridine(34) synthase MnmA	-
V6C60_RS06750 (V6C60_06740)	-	1352198..1352866 (+)	669	WP_047796355.1	tetratricopeptide repeat protein	-
V6C60_RS06755 (V6C60_06745)	recD2	1352868..1355318 (+)	2451	WP_047796354.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6C60_RS06760 (V6C60_06750)	alaS	1355658..1358288 (+)	2631	WP_002436124.1	alanine--tRNA ligase	-
V6C60_RS06765 (V6C60_06755)	-	1358352..1358612 (+)	261	WP_002435994.1	IreB family regulatory phosphoprotein	-
V6C60_RS06770 (V6C60_06760)	ruvX	1358614..1359042 (+)	429	WP_002435990.1	Holliday junction resolvase RuvX	-
V6C60_RS06775 (V6C60_06765)	-	1359056..1359376 (+)	321	WP_002436074.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 816 a.a.
• Molecular weight: 91861.27 Da
• Isoelectric Point: 4.6606

>NTDB_id=937725 V6C60_RS06755 WP_047796354.1 1352868..1355318(+) (recD2) [Staphylococcus capitis subsp. urealyticus strain Sc1516941]
MSDPTLFDKSMIKGTVDAILFQNNDNFYTVLKVDTIETNESFDSMPTVVGFLPNVVEGDVYTFKGQIVEHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNALGENAINDILNNPEVLEKVPSLPKKKQKQIAEQISSNQESEKIM
IRLHDLGFGPKLSMAIYQFYMGETLKILDENPYQLVYDIKGIGFNKADQLARNIGIAADSEERLKAGLLYTLEEECIKQG
HTYLPNSYVIESTQTMLNDSSEVVISTKMLEQKIEQLSEEKKLIQSEEQVSIPSLYYSELKSVQNLYRIQANNKKLKEIE
QSDLQMHIGEIESLNQVNYATSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVVLA
APTGRASKRLQESTGLEAMTIHRLIGWNQETQPEDILDNEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQIVFVGDEDQ
LPSVGPGQVFKDLIDSKRIPRVNLTEVYRQQDGSSIVDLAHRMKVGEPIDITQRFHDRSFINCTSDQIPDVVDKVVKSAV
SKGYNMSDIQVLAPMYKGNAGIKRLNQVLQSILNPKEKDSREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
AKENALNKDVIVVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVLL
GDPQAFDIGLKTKGQERLTQLNHLLKSYFGDEQEVIGSSGHSSVNSTEKHDTTQTEEENATTDAPHNDIVLSETTIFKID
PMINMGEMTPYDFAEH

Nucleotide

• Length: 2451 bp

>NTDB_id=937725 V6C60_RS06755 WP_047796354.1 1352868..1355318(+) (recD2) [Staphylococcus capitis subsp. urealyticus strain Sc1516941]
ATGTCTGACCCTACACTTTTTGATAAATCAATGATCAAAGGTACTGTAGATGCTATATTATTTCAAAATAATGATAATTT
CTATACAGTTCTTAAAGTAGACACGATTGAAACGAATGAGTCCTTTGATAGCATGCCAACTGTTGTAGGGTTTCTTCCAA
ATGTAGTTGAAGGAGACGTCTATACGTTTAAAGGGCAAATTGTCGAACACCCACGTTATGGTAAACAGTTAAAAGCTGAA
ACTTTTGAAAAGGAACTTCCACAAACCAAAGATGCAATTATTAGTTATTTATCAAGCGATTTATTTAAAGGAATAGGAAA
AAAAACAGCTCAAAATATTGTTAATGCATTAGGCGAGAATGCAATCAATGATATATTAAATAATCCTGAAGTGTTAGAAA
AAGTCCCTAGTTTACCTAAGAAAAAGCAAAAGCAGATTGCAGAACAAATAAGTTCGAATCAAGAATCAGAAAAAATAATG
ATTCGGTTACATGATTTAGGATTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATATGGGAGAAACATTGAAAAT
ACTAGACGAAAATCCTTATCAACTCGTTTATGATATTAAAGGAATAGGTTTTAATAAAGCTGATCAATTAGCGCGAAACA
TTGGTATTGCAGCAGATTCTGAAGAGCGTTTGAAAGCAGGATTGCTTTATACACTTGAAGAAGAATGTATCAAACAAGGG
CATACATATTTGCCTAATTCATATGTGATTGAATCAACGCAAACTATGCTTAACGATAGCTCTGAAGTTGTTATTTCTAC
TAAAATGCTAGAGCAAAAGATTGAGCAACTCTCTGAAGAGAAAAAATTGATTCAAAGCGAAGAACAAGTTTCAATTCCAA
GTTTGTATTATTCGGAATTAAAGAGTGTTCAAAATCTTTATCGTATTCAAGCTAATAATAAAAAGTTAAAAGAAATCGAA
CAATCAGATTTACAAATGCATATTGGTGAAATTGAGTCACTAAATCAAGTAAATTATGCAACTTCACAGAAAGAGGCTTT
AGAGACGGCAATCAATTCAAAAGTGATGCTTCTTACAGGTGGCCCCGGTACTGGTAAAACTACTGTCATTAAAGGCATCG
TAGAGCTTTATGCGGAAATACATGGATTATCATTGGATTATGATGATTACAACGAGGATGATTATCCAGTTGTACTTGCT
GCACCAACTGGACGCGCATCTAAAAGACTTCAGGAATCTACTGGATTAGAAGCAATGACAATTCACCGTTTAATAGGTTG
GAATCAAGAAACACAACCTGAAGATATTTTAGATAATGAAATTAATGCACGGCTTATCATTATAGATGAAATGTCTATGG
TAGATACATGGTTATTTCATCAATTTTTAAGTGCTGTTCCATTAGATGCTCAAATTGTATTTGTAGGAGATGAAGACCAA
CTCCCTTCAGTTGGACCGGGTCAAGTGTTTAAAGACCTCATTGATTCTAAAAGAATTCCGCGTGTTAATCTTACGGAAGT
GTATCGCCAACAAGATGGCTCAAGTATTGTTGATTTAGCACATCGTATGAAAGTAGGCGAACCCATAGATATAACTCAAC
GTTTTCACGATCGCAGTTTCATTAACTGTACTTCAGACCAAATACCTGATGTAGTAGATAAAGTAGTTAAAAGTGCAGTG
AGTAAAGGGTATAATATGAGTGATATTCAAGTCCTTGCTCCTATGTATAAAGGTAATGCAGGAATAAAACGTCTCAATCA
AGTATTACAATCTATTTTAAATCCAAAGGAAAAAGATAGTCGTGAAATTGAATTCGGAGATGTTGTATTTCGTAAAGGAG
ATAAAGTACTTCAGTTGGTCAATAGACCTAATGACAATATATTTAATGGTGATATTGGTGTAATTGTAGGCATATTTTGG
GCTAAAGAAAATGCTCTTAATAAAGATGTAATAGTAGTAGATTTTGAAGGAAATGAAATTACCTTTACTCGACAAGATTT
ACTTGAACTTACTCATGCTTATTGTACATCTATTCATAAATCTCAAGGGTCAGAATTTCCAATTGTTATTATGCCTATAG
TTAAACAATACTTTCGTATGTTACAAAGACCTATCCTTTATACGGGTCTGACCCGTGCTAAGCAATCACTTGTTTTACTT
GGGGATCCCCAAGCATTTGATATAGGACTGAAGACAAAAGGCCAAGAACGTTTAACTCAGTTGAATCACTTATTAAAATC
TTATTTTGGTGATGAGCAAGAAGTTATAGGTAGTTCAGGTCATTCATCTGTAAATAGCACTGAAAAACATGATACTACAC
AAACTGAAGAAGAGAACGCAACAACTGACGCACCACATAATGACATTGTTCTTAGTGAAACCACTATATTTAAAATTGAT
CCTATGATTAATATGGGAGAAATGACGCCTTACGATTTTGCCGAGCATTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.14	99.755	0.49