Detailed information NTG0093693

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: LLL8_RS07935
• Genome accession: NZ_AP025700
• Coordinates: 1628935..1629360 (-)
• Length: 141 a.a.
• NCBI ID: WP_195229129.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain L8
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1623935..1634360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLL8_RS07895 (LLL8_15470)	-	1624836..1625225 (-)	390	WP_139917180.1	DUF722 domain-containing protein	-
LLL8_RS07900 (LLL8_15480)	-	1625342..1625611 (+)	270	WP_161935088.1	DUF3892 domain-containing protein	-
LLL8_RS07905 (LLL8_15490)	-	1625732..1625887 (+)	156	WP_251899739.1	hypothetical protein	-
LLL8_RS07910 (LLL8_15500)	-	1626107..1626493 (+)	387	WP_139917185.1	DUF805 domain-containing protein	-
LLL8_RS07915 (LLL8_15510)	-	1626691..1627359 (+)	669	WP_139917187.1	type 1 glutamine amidotransferase	-
LLL8_RS07920 (LLL8_15520)	-	1627461..1627682 (-)	222	WP_139917189.1	hypothetical protein	-
LLL8_RS07925 (LLL8_15530)	-	1627663..1628466 (-)	804	WP_251899740.1	helix-turn-helix domain-containing protein	-
LLL8_RS07930 (LLL8_15540)	-	1628480..1628791 (-)	312	WP_251899741.1	endonuclease	-
LLL8_RS07935 (LLL8_15550)	ssb	1628935..1629360 (-)	426	WP_195229129.1	single-stranded DNA-binding protein	Machinery gene
LLL8_RS07940 (LLL8_15560)	-	1629353..1630111 (-)	759	WP_251899742.1	Rad52/Rad22 family DNA repair protein	-
LLL8_RS07945 (LLL8_15570)	-	1630120..1630515 (-)	396	WP_251899743.1	hypothetical protein	-
LLL8_RS07950 (LLL8_15580)	-	1630616..1630852 (-)	237	WP_098384009.1	DUF1408 domain-containing protein	-
LLL8_RS07955 (LLL8_15590)	-	1630948..1631172 (+)	225	WP_098384010.1	hypothetical protein	-
LLL8_RS07960 (LLL8_15610)	-	1631403..1631741 (-)	339	WP_098397254.1	hypothetical protein	-
LLL8_RS07965 (LLL8_15620)	-	1631755..1632549 (-)	795	WP_251899744.1	phage antirepressor KilAC domain-containing protein	-
LLL8_RS07970 (LLL8_15630)	-	1632565..1632813 (-)	249	WP_251899745.1	helix-turn-helix transcriptional regulator	-
LLL8_RS07975 (LLL8_15640)	-	1632969..1633715 (+)	747	WP_251899746.1	hypothetical protein	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15824.59 Da
• Isoelectric Point: 5.1972

>NTDB_id=93693 LLL8_RS07935 WP_195229129.1 1628935..1629360(-) (ssb) [Lactococcus lactis strain L8]
MINNVTLVGRITKEPELRYTQQNKAVASFTLAVNRQFKNFNGEREADFINCVIWGKSAENLANWTHKGQLIGVTGSIQTR
NYENQQGQRVYIMEVVASNFQVLEKSNQANGERVGNPAAKPQNNDSFGSDPMEISDDDLPF

Nucleotide

• Length: 426 bp

>NTDB_id=93693 LLL8_RS07935 WP_195229129.1 1628935..1629360(-) (ssb) [Lactococcus lactis strain L8]
ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAGGAACCTGAACTTAGATATACACAACAAAATAAAGCAGTTGC
TTCATTTACTCTTGCAGTTAATCGTCAATTTAAGAATTTCAATGGAGAAAGAGAAGCTGACTTTATCAATTGTGTTATTT
GGGGTAAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTACTGGTAGTATTCAAACTCGC
AACTATGAGAATCAACAAGGGCAACGAGTTTATATTATGGAGGTTGTCGCAAGTAATTTCCAAGTACTTGAAAAAAGTAA
TCAAGCAAATGGTGAACGAGTTGGTAATCCAGCTGCAAAACCACAAAATAATGATTCTTTTGGAAGTGATCCAATGGAAA
TTTCAGATGATGACCTACCATTTTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	53.529	100	0.645
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.581	100	0.617
ssbB/cilA	Streptococcus mitis SK321	43.262	100	0.433
ssbB/cilA	Streptococcus mitis NCTC 12261	43.262	100	0.433
ssbB/cilA	Streptococcus pneumoniae TIGR4	43.262	100	0.433
ssbB/cilA	Streptococcus pneumoniae D39	42.553	100	0.426
ssbB/cilA	Streptococcus pneumoniae Rx1	42.553	100	0.426
ssbB/cilA	Streptococcus pneumoniae R6	42.553	100	0.426
ssbB	Streptococcus sobrinus strain NIDR 6715-7	42.553	100	0.426
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.769	73.759	0.411
ssbA	Streptococcus mutans UA159	38.298	100	0.383
ssbB	Lactococcus lactis subsp. cremoris KW2	49.515	73.05	0.362