Detailed information NTG0932579

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACDK45_RS04790
• Genome accession: NZ_CP167879
• Coordinates: 954866..956206 (+)
• Length: 446 a.a.
• NCBI ID: WP_044365034.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NTHi52
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 949866..961206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDK45_RS04775 (ACDK45_04775)	lrp	950921..951400 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
ACDK45_RS04780 (ACDK45_04780)	-	951402..954170 (+)	2769	WP_044365032.1	DNA translocase FtsK	-
ACDK45_RS04785 (ACDK45_04785)	lolA	954188..954805 (+)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
ACDK45_RS04790 (ACDK45_04790)	rarA	954866..956206 (+)	1341	WP_044365034.1	replication-associated recombination protein A	Machinery gene
ACDK45_RS04795 (ACDK45_04795)	-	956293..957435 (-)	1143	WP_005687705.1	hypothetical protein	-
ACDK45_RS04800 (ACDK45_04800)	-	957445..958668 (-)	1224	WP_044365036.1	DNA cytosine methyltransferase	-
ACDK45_RS04805 (ACDK45_04805)	aroA	958922..960220 (-)	1299	WP_044365039.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
ACDK45_RS04810 (ACDK45_04810)	purU	960220..961056 (-)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50292.19 Da
• Isoelectric Point: 6.3312

>NTDB_id=932579 ACDK45_RS04790 WP_044365034.1 954866..956206(+) (rarA) [Haemophilus influenzae strain NTHi52]
MSNLNFDFAENDFRPLAAKMRPTNLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADEMENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAIYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYSAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=932579 ACDK45_RS04790 WP_044365034.1 954866..956206(+) (rarA) [Haemophilus influenzae strain NTHi52]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACAAATCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAATGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGACGCTGCACTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCATGGGATTGCTTT
ACTAGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATTATTTATCTTGCGGTAGCTCCAAAAAGTAATGC
GATTTATACTGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTGCCTGATTATGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATAGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCAGCT
GGTGAAAATTATTTCCCGCCTGAATTAAAAGACACTCAATATTATTTTCCGACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	94.843	0.37