Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1582_RS10445 Genome accession   NZ_CP143688
Coordinates   2193334..2193960 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei subsp. xiangfangensis strain ECC-182     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2188334..2198960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1582_RS10425 (V1582_10420) - 2188733..2190493 (-) 1761 WP_032608967.1 Lon protease family protein -
  V1582_RS10430 (V1582_10425) matP 2190680..2191132 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  V1582_RS10435 (V1582_10430) ompA 2191198..2192250 (-) 1053 WP_017694761.1 porin OmpA -
  V1582_RS10440 (V1582_10435) sulA 2192607..2193116 (-) 510 WP_003858155.1 SOS-induced cell division inhibitor SulA -
  V1582_RS10445 (V1582_10440) sxy/tfoX 2193334..2193960 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  V1582_RS10450 (V1582_10445) yccS 2193917..2196079 (-) 2163 WP_003858151.1 YccS family putative transporter -
  V1582_RS10455 (V1582_10450) - 2196098..2196544 (-) 447 WP_023324415.1 YccF domain-containing protein -
  V1582_RS10460 (V1582_10455) helD 2196667..2198721 (+) 2055 WP_023324416.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=930670 V1582_RS10445 WP_023315767.1 2193334..2193960(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-182]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=930670 V1582_RS10445 WP_023315767.1 2193334..2193960(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain ECC-182]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572