Detailed information NTG0929568

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: V1502_RS15125
• Genome accession: NZ_CP143546
• Coordinates: 3045502..3047898 (-)
• Length: 798 a.a.
• NCBI ID: WP_409251467.1
• Uniprot ID: -
• Organism: Bacillus sp. SCS-153A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3040502..3052898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1502_RS15110 (V1502_15110)	-	3043404..3044477 (-)	1074	WP_409251464.1	AI-2E family transporter	-
V1502_RS15115 (V1502_15115)	-	3044954..3045094 (-)	141	WP_409251465.1	YrzQ family protein	-
V1502_RS15120 (V1502_15120)	-	3045102..3045287 (-)	186	WP_409251466.1	hypothetical protein	-
V1502_RS15125 (V1502_15125)	recD2	3045502..3047898 (-)	2397	WP_409251467.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V1502_RS15130 (V1502_15130)	-	3047921..3048586 (-)	666	WP_409251468.1	tetratricopeptide repeat protein	-
V1502_RS15135 (V1502_15135)	mnmA	3048861..3049976 (-)	1116	WP_409251469.1	tRNA 2-thiouridine(34) synthase MnmA	-
V1502_RS15140 (V1502_15140)	-	3050717..3051859 (-)	1143	WP_409251470.1	cysteine desulfurase family protein	-
V1502_RS15145 (V1502_15145)	cymR	3051874..3052293 (-)	420	WP_409251471.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90047.90 Da
• Isoelectric Point: 4.8297

>NTDB_id=929568 V1502_RS15125 WP_409251467.1 3045502..3047898(-) (recD2) [Bacillus sp. SCS-153A]
MSRQDSLELFDENEIYIKGKHLVTIFHNESNLYSVIRIRVESTNAQYEDKEAVITGHFPKIHEQETYVFHGAFKDHPRFG
MQFHAERFKKEIPQTKQGIVDYLSSELFKGIGKKTAEKVVEQLGENAISKILETPSLLDDIPKLPPEKAKALYDSLVEHQ
GLERVMISLNGFGFGPQISMKIYQAYKEQALEILQKNPYKLVEDIEGIGFGRADELGSKLGITGNHPDRIKAGCLYTLEQ
NCLQDGHVYLEAETLLTNVKSLLEKSQNERISFDDISREIIKLEEEGKIIGEERRVYLPSLYFSEKGLVTNIERLLSQDQ
YTDQFPQSEFLMALGGLEERLNVQYAPTQKEAIETALMSPMMLLTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYKDEP
FPILLAAPTGRAAKRMTESTGLPAGTIHRLLGWNGTDSFEYDEDRSIQGKLLIVDEMSMVDTWLANQLFKALPDDIQVIL
VGDEDQLPSVGPGQVLKDLLRSEVIPTVRLKDIYRQEEGSSIIEMAHEMKEGKLPGNLLQPQKDRSFIKCTTSQIAEVVE
KVVTNAKAKGYSAKDIQVLAPMYRGPAGIDKLNVMLQEIFNSNDGTRKEIVFGETKYRIGDKVLQLVNQPESNVFNGDIG
EVISIFYAKENTEKQDMVLVSFEGNEVTYTRQELNQITLAYCCSIHKSQGSEFPIVILPVVKSYFRMLRRNLLYTAITRS
RNALILCGEEQALRMGVEREEDVQRLTTLYEKLRGIKTEGVTESPAGEEDAPPQNKLEEMLQADPMIGMEKVTPYDFL

Nucleotide

• Length: 2397 bp

>NTDB_id=929568 V1502_RS15125 WP_409251467.1 3045502..3047898(-) (recD2) [Bacillus sp. SCS-153A]
ATGAGCAGGCAAGACTCGTTAGAACTTTTCGACGAAAATGAAATTTATATAAAGGGTAAACATCTTGTCACCATCTTCCA
CAATGAGAGCAACCTTTATTCAGTGATCAGAATCAGAGTGGAGTCCACTAATGCCCAATATGAAGACAAGGAAGCGGTCA
TAACTGGACACTTCCCTAAGATCCATGAACAGGAAACGTATGTGTTCCATGGTGCTTTTAAGGACCATCCGAGGTTTGGT
ATGCAATTTCATGCGGAGCGTTTCAAAAAAGAAATCCCCCAGACAAAACAAGGAATTGTCGACTACCTCTCAAGTGAGCT
GTTTAAAGGGATAGGAAAAAAAACAGCCGAAAAAGTTGTGGAACAGCTTGGAGAGAATGCAATCAGCAAAATCCTGGAGA
CCCCCTCCCTTCTTGATGATATTCCGAAACTTCCTCCTGAGAAGGCAAAGGCGCTTTATGATTCCCTTGTTGAACATCAA
GGGTTGGAACGAGTGATGATAAGCCTTAATGGATTTGGTTTTGGACCCCAAATTTCAATGAAGATTTACCAGGCTTATAA
GGAACAGGCACTTGAAATCCTTCAGAAAAATCCTTACAAACTAGTCGAAGATATAGAAGGGATCGGGTTTGGCCGTGCGG
ATGAGCTTGGCAGTAAACTCGGCATCACCGGCAATCATCCTGACCGGATAAAAGCTGGCTGTCTCTACACCCTGGAACAA
AACTGTCTGCAGGATGGCCATGTTTACCTGGAAGCTGAAACCCTCTTGACCAATGTCAAATCTCTTTTGGAAAAGAGCCA
GAACGAGAGAATCAGCTTCGATGATATCTCGCGCGAAATCATAAAACTTGAAGAAGAAGGGAAGATCATTGGGGAAGAAA
GACGAGTGTACCTTCCATCTTTGTATTTCTCCGAAAAGGGGCTTGTCACGAATATTGAAAGACTGCTTTCCCAAGATCAA
TACACTGATCAGTTTCCTCAATCAGAATTCCTGATGGCGCTTGGCGGGCTTGAAGAAAGGTTGAATGTCCAATATGCCCC
GACCCAGAAAGAAGCGATAGAGACAGCTCTTATGTCTCCGATGATGCTTTTGACGGGAGGACCGGGTACAGGAAAGACAA
CGGTTATAAAGGGAATCGTCGAGCTTTATGCTGAATTGCACGGATGCTCGCTTGAACCTAAGGATTATAAAGACGAACCC
TTTCCTATTCTTCTGGCTGCTCCAACAGGGAGGGCTGCCAAGAGGATGACAGAATCCACTGGACTTCCCGCCGGAACAAT
CCACAGGCTGCTTGGCTGGAACGGTACAGACAGCTTCGAGTATGATGAAGACCGCTCCATACAAGGCAAGCTGCTTATTG
TTGATGAAATGTCAATGGTGGACACCTGGCTGGCAAATCAGCTGTTCAAAGCGCTTCCTGACGATATACAGGTGATTCTA
GTCGGAGATGAAGATCAGCTGCCGTCTGTAGGTCCAGGGCAGGTGTTGAAAGACCTCCTGCGGTCAGAAGTCATCCCGAC
TGTCAGGCTGAAAGACATCTACCGTCAGGAGGAAGGGTCATCCATCATTGAGATGGCCCACGAAATGAAAGAGGGGAAGC
TGCCAGGAAACCTGCTTCAGCCTCAGAAGGATCGTTCATTTATCAAGTGTACAACCTCCCAGATCGCAGAAGTTGTGGAG
AAGGTTGTCACCAATGCCAAAGCGAAAGGGTACAGTGCGAAGGATATTCAAGTGCTTGCCCCTATGTACAGAGGTCCTGC
CGGTATTGATAAATTGAATGTAATGCTTCAGGAAATATTCAACAGCAATGACGGCACCCGGAAGGAGATCGTCTTCGGGG
AGACGAAATACCGGATCGGCGATAAGGTTCTTCAACTGGTCAATCAGCCGGAAAGCAATGTGTTCAACGGTGATATCGGT
GAAGTCATTTCGATATTTTATGCAAAGGAAAATACCGAAAAACAGGATATGGTCCTTGTCTCCTTTGAAGGGAATGAGGT
AACCTATACCCGCCAGGAACTGAATCAGATCACGCTTGCATACTGCTGTTCCATCCATAAGTCACAGGGTAGCGAATTTC
CGATTGTCATCCTGCCGGTCGTGAAAAGTTACTTCAGGATGTTAAGGCGCAATCTGCTTTATACGGCCATCACACGAAGC
CGAAACGCTTTGATTCTCTGTGGGGAAGAACAGGCGCTCCGGATGGGAGTGGAACGAGAGGAAGACGTTCAGAGACTTAC
GACTCTTTATGAAAAATTGAGGGGGATTAAAACAGAAGGTGTTACCGAATCACCAGCCGGCGAAGAAGATGCTCCTCCTC
AAAACAAACTGGAAGAAATGCTGCAGGCAGACCCGATGATCGGAATGGAAAAGGTTACACCTTATGATTTCCTTTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• AAA domain (AAA_30) (345-552)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (592-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	62.233	99.875	0.622