Detailed information NTG0929116

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AB3239_RS14525
• Genome accession: NZ_CP166831
• Coordinates: 2766664..2767929 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TE3T-UV25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2761664..2772929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3239_RS14505 (AB3239_14505)	yrrB	2763035..2763655 (-)	621	WP_370957462.1	tetratricopeptide repeat protein	-
AB3239_RS14510 (AB3239_14510)	mnmA	2763741..2764856 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB3239_RS14515 (AB3239_14515)	iscSA	2764887..2766026 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
AB3239_RS14520 (AB3239_14520)	cymR	2766045..2766461 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AB3239_RS14525 (AB3239_14525)	rarA	2766664..2767929 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
AB3239_RS14530 (AB3239_14530)	tcdA	2767969..2768733 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
AB3239_RS14540 (AB3239_14540)	aspS	2769068..2770846 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
AB3239_RS14545 (AB3239_14545)	hisS	2770860..2772134 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
AB3239_RS14550 (AB3239_14550)	yrzK	2772516..2772686 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=929116 AB3239_RS14525 WP_014480427.1 2766664..2767929(+) (rarA) [Bacillus subtilis strain TE3T-UV25]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=929116 AB3239_RS14525 WP_014480427.1 2766664..2767929(+) (rarA) [Bacillus subtilis strain TE3T-UV25]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993