Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AB6W33_RS07150 Genome accession   NZ_CP163561
Coordinates   1350044..1351783 (-) Length   579 a.a.
NCBI ID   WP_002921285.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS-B4009     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345044..1356783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6W33_RS07110 (AB6W33_07100) - 1345127..1346332 (-) 1206 WP_000201883.1 site-specific integrase -
  AB6W33_RS07115 (AB6W33_07105) - 1346335..1346583 (-) 249 WP_002921272.1 DUF3173 family protein -
  AB6W33_RS07120 (AB6W33_07110) - 1346853..1347071 (-) 219 WP_000278092.1 helix-turn-helix domain-containing protein -
  AB6W33_RS07125 (AB6W33_07115) - 1347182..1347981 (-) 800 Protein_1326 IS30 family transposase -
  AB6W33_RS07130 (AB6W33_07120) - 1348028..1348278 (+) 251 Protein_1327 hypothetical protein -
  AB6W33_RS07135 (AB6W33_07125) - 1348634..1348897 (+) 264 Protein_1328 DUF5960 family protein -
  AB6W33_RS07140 (AB6W33_07130) - 1349153..1349647 (-) 495 WP_000482660.1 LPXTG cell wall anchor domain-containing protein -
  AB6W33_RS07145 (AB6W33_07135) - 1349666..1349932 (+) 267 Protein_1330 transposase -
  AB6W33_RS07150 (AB6W33_07140) rcrQ 1350044..1351783 (-) 1740 WP_002921285.1 ABC transporter ATP-binding protein Regulator
  AB6W33_RS07155 (AB6W33_07145) rcrP 1351764..1353509 (-) 1746 WP_373660878.1 ABC transporter ATP-binding protein Regulator
  AB6W33_RS07160 (AB6W33_07150) - 1353506..1354531 (-) 1026 WP_000845068.1 phosphotransferase family protein -
  AB6W33_RS07165 (AB6W33_07155) - 1354515..1354985 (-) 471 WP_000142891.1 MarR family winged helix-turn-helix transcriptional regulator -
  AB6W33_RS07170 (AB6W33_07160) - 1355950..1356195 (+) 246 WP_001813542.1 hypothetical protein -
  AB6W33_RS07175 (AB6W33_07165) - 1356192..1356527 (+) 336 WP_000806926.1 hypothetical protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64132.51 Da        Isoelectric Point: 5.5046

>NTDB_id=926813 AB6W33_RS07150 WP_002921285.1 1350044..1351783(-) (rcrQ) [Streptococcus agalactiae strain GBS-B4009]
MNLTMLKRLYTYIKPNRLGFFTALFLVAAGTGLTVLAPSYTGQITTQLYNGISQGSFDWKAIFQLSVIVAGLYLVGQSLV
FLASFTLAKVIAKSVERLRNEVSSKIHRLPINYYDTRGNGEILSVITNDIDILNNFLSQNLQEIIVQTVTIVGIFSIMLS
INGWLTLVAVIMVPISLLTAASSASFGQKMYEKQQNLIGQVNGYIEEIYNGHNVVQAFNYQDRAKAKFDSLNKELQSTAE
KAETYASYVMPLIKIVNNAGYVISAVWGSFMALQGTMTVGNVQAMLQYTQQFNEPFSSIAGMVGAYSSAMAGSQRIFELL
DETEEVADQATSQDLSKQAGRVEFKHVKFGYTPDNLLMQDVNVTVEPGQKVAIVGPTGAGKTTLINLLMRFYEINDGQIL
VDGVDTRQMSREQLRSQFGMVLQDTWLFEGSIMENLQYGRENISHDQAISAAKMASAHSFIKTQPGSYDMVLENNGENIS
QGERQLLTIARAIAANPKMLILDEATSNVDTYTEQLIQKAMAKLMEGRTSFVIAHRLSTIKDAHVILYMEKGDIKEVGNH
DELMALDGKYASLYNSQFV

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=926813 AB6W33_RS07150 WP_002921285.1 1350044..1351783(-) (rcrQ) [Streptococcus agalactiae strain GBS-B4009]
ATGAACTTGACAATGCTTAAACGTTTATACACCTATATCAAACCCAATCGTCTTGGTTTCTTCACAGCACTTTTCCTTGT
TGCTGCTGGTACTGGACTTACCGTCCTAGCGCCAAGCTACACGGGGCAAATCACGACTCAGCTCTACAATGGCATTAGTC
AAGGCTCTTTTGATTGGAAAGCTATTTTCCAATTGAGTGTTATTGTTGCAGGTCTCTATCTAGTTGGGCAAAGTCTGGTT
TTCTTGGCTTCCTTCACCTTAGCCAAAGTTATCGCTAAGTCAGTCGAGCGTTTGAGAAATGAGGTTAGTAGTAAAATTCA
CCGTCTACCTATTAATTATTATGATACCCGTGGTAATGGTGAAATCCTCAGTGTCATCACCAATGATATTGACATCCTCA
ATAACTTCCTCAGCCAGAACTTGCAGGAAATTATTGTTCAGACTGTGACCATTGTGGGCATTTTCTCCATCATGCTCTCT
ATCAATGGTTGGTTAACCTTGGTTGCTGTCATCATGGTTCCTATCTCCCTCCTGACAGCAGCGAGTTCAGCTAGCTTTGG
ACAAAAGATGTATGAAAAGCAGCAGAACTTGATTGGGCAGGTCAATGGCTACATTGAAGAAATTTATAACGGTCATAATG
TCGTGCAGGCTTTTAACTACCAAGACCGTGCCAAGGCAAAATTCGATAGTCTTAATAAAGAATTGCAGAGCACCGCAGAA
AAGGCAGAAACTTATGCCAGCTATGTCATGCCACTGATTAAGATTGTCAATAATGCAGGCTATGTCATCAGTGCCGTCTG
GGGAAGTTTTATGGCACTACAAGGCACCATGACAGTTGGTAATGTCCAAGCCATGCTTCAATACACCCAGCAGTTCAATG
AGCCATTTAGCTCTATCGCTGGTATGGTCGGGGCTTATAGCTCAGCCATGGCAGGTAGTCAGCGTATCTTTGAACTGCTT
GACGAGACTGAAGAAGTAGCTGACCAAGCCACAAGCCAAGACCTGTCCAAACAAGCAGGACGTGTCGAATTCAAGCATGT
CAAGTTTGGCTACACACCTGATAATCTGCTGATGCAAGATGTTAATGTTACCGTTGAACCTGGTCAAAAAGTAGCCATTG
TGGGACCTACTGGGGCAGGTAAAACCACCCTCATCAACCTCCTCATGCGTTTCTATGAAATCAATGACGGTCAAATTTTA
GTGGACGGTGTAGACACACGTCAGATGAGTCGTGAACAGCTCCGTAGCCAGTTTGGCATGGTGCTCCAAGATACTTGGCT
CTTTGAAGGCTCTATCATGGAAAATCTCCAGTATGGTCGAGAGAATATCTCCCATGACCAAGCTATCTCTGCTGCCAAAA
TGGCATCAGCACACAGCTTTATCAAAACCCAGCCAGGCAGTTACGATATGGTTTTGGAAAATAACGGAGAGAACATCTCT
CAAGGTGAGCGTCAGCTTTTGACAATTGCCCGTGCCATTGCTGCCAATCCTAAAATGCTGATTTTGGACGAGGCGACATC
TAACGTTGATACCTATACTGAGCAGCTCATTCAAAAAGCCATGGCCAAACTCATGGAAGGGCGCACCAGCTTTGTCATCG
CCCACCGTTTGTCGACCATTAAGGATGCTCACGTCATTCTCTACATGGAAAAAGGTGATATCAAGGAGGTCGGCAACCAT
GATGAGCTCATGGCTCTAGATGGCAAATATGCTAGTCTCTATAATAGCCAGTTTGTCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.84

99.482

0.416