Detailed information NTG0925849

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AB5991_RS14005
• Genome accession: NZ_CP163447
• Coordinates: 2586067..2587332 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SD2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2581067..2592332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5991_RS13985 (AB5991_13985)	yrrB	2582438..2583058 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
AB5991_RS13990 (AB5991_13990)	mnmA	2583144..2584259 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB5991_RS13995 (AB5991_13995)	iscSA	2584290..2585429 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
AB5991_RS14000 (AB5991_14000)	cymR	2585448..2585864 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AB5991_RS14005 (AB5991_14005)	rarA	2586067..2587332 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
AB5991_RS14010 (AB5991_14010)	tcdA	2587372..2588136 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
AB5991_RS14020 (AB5991_14020)	aspS	2588471..2590249 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
AB5991_RS14025 (AB5991_14025)	hisS	2590263..2591537 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
AB5991_RS14030 (AB5991_14030)	yrzK	2591919..2592089 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=925849 AB5991_RS14005 WP_014480427.1 2586067..2587332(+) (rarA) [Bacillus subtilis strain SD2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=925849 AB5991_RS14005 WP_014480427.1 2586067..2587332(+) (rarA) [Bacillus subtilis strain SD2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993