Detailed information NTG0925595

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AB5J54_RS07835
• Genome accession: NZ_CP163444
• Coordinates: 1693702..1695054 (-)
• Length: 450 a.a.
• NCBI ID: WP_369149256.1
• Uniprot ID: -
• Organism: Streptomyces sp. R44
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1688702..1700054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J54_RS07815 (AB5J54_07815)	-	1689508..1689861 (-)	354	WP_369143164.1	DUF6167 family protein	-
AB5J54_RS07820 (AB5J54_07820)	-	1689868..1690305 (-)	438	WP_369143165.1	DUF948 domain-containing protein	-
AB5J54_RS07825 (AB5J54_07825)	-	1690463..1692679 (+)	2217	WP_369143166.1	AAA family ATPase	-
AB5J54_RS07830 (AB5J54_07830)	rpsD	1692714..1693328 (-)	615	WP_015032311.1	30S ribosomal protein S4	-
AB5J54_RS07835 (AB5J54_07835)	rarA	1693702..1695054 (-)	1353	WP_369149256.1	replication-associated recombination protein A	Machinery gene
AB5J54_RS07840 (AB5J54_07840)	-	1695097..1695723 (-)	627	WP_352021688.1	vitamin K epoxide reductase family protein	-
AB5J54_RS07845 (AB5J54_07845)	hisS	1695856..1697118 (-)	1263	WP_369143168.1	histidine--tRNA ligase	-
AB5J54_RS07850 (AB5J54_07850)	-	1697129..1697836 (-)	708	WP_369143169.1	MBL fold metallo-hydrolase	-
AB5J54_RS07855 (AB5J54_07855)	-	1697999..1698793 (+)	795	WP_369143170.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 450 a.a.
• Molecular weight: 47604.96 Da
• Isoelectric Point: 6.1455

>NTDB_id=925595 AB5J54_RS07835 WP_369149256.1 1693702..1695054(-) (rarA) [Streptomyces sp. R44]
MEPDLFTAAAEDRQEKDPASSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGDGDGGPAGASSVILWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLKGLMARALTGERGLGGAVTLPEDAEAHLLRVAGGDARRALTALEAAAGAAIAKGEAE
ITLQTVEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNSATTAIGAALADVRNGLAGSVPPHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIASQQYAPDSIHGRQYYEPTRYGAEARYADVVERVRERLKGDG

Nucleotide

• Length: 1353 bp

>NTDB_id=925595 AB5J54_RS07835 WP_369149256.1 1693702..1695054(-) (rarA) [Streptomyces sp. R44]
GTGGAGCCCGACCTCTTTACCGCAGCAGCCGAAGACCGCCAGGAGAAGGACCCTGCCAGCAGCCCGCTGGCCGTCCGGAT
GCGCCCCCGCACCCTCGACGAGGTGGTGGGGCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGACTCGTCGGGG
ACGGGGACGGCGGCCCCGCCGGGGCCTCCTCGGTGATCCTCTGGGGCCCGCCGGGAATCGGCAAGACGACCCTCGCGTAC
GTCGTGTCGAAGGCGACGAACAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCTGGCGTCAAGGAGGTCCGGGCCGTCAT
CGACGGCGCCCGGCGCGCGGTGGGCGGCTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCGCTCCTTCCGGCCGTCGAGAACCGCTGGGTGACGCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCCGTCATCTCCCCGCTCCTCTCCCGCTCCCTGCTCCTCACCCTGGAACCGCTGACCGACGAGGACCTGAAGGGCCTGAT
GGCCCGGGCGCTCACCGGCGAGCGGGGACTCGGCGGGGCCGTGACCCTGCCGGAGGACGCCGAGGCGCACCTCCTGCGCG
TCGCCGGCGGCGACGCCCGGCGCGCCCTGACCGCCCTGGAGGCGGCGGCGGGCGCCGCGATCGCCAAGGGCGAGGCGGAG
ATCACCCTCCAGACCGTCGAGGAGACCGTCGACCGCGCGGCCGTGAAGTACGACCGGGACGGCGACCAGCACTACGACGT
GGCCAGCGCGCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCGGCCCTGCACTACCTGGCGCGGATGATCGAGGCGG
GGGAGGACCCGCGCTTCATCGCCCGCCGGCTGATGATCTCCGCGAGCGAGGACATCGGCCTCGCCGACCCCAACGCCCTG
CCGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGTTTCCCCGAGGCGGCCCTCACCCTGAGCCACGCCACCAT
CGCCCTGGCCCTGGCCCCGAAGTCGAACTCCGCGACGACCGCGATCGGCGCCGCCCTCGCGGACGTCCGCAACGGCCTCG
CGGGCTCGGTCCCGCCGCACCTGCGGGACGGCCACTACAAGGGCGCGGCCAAGCTCGGCCACGCGCAGGGGTACGTGTAC
CCCCACGACGTACCGGGCGGCATCGCGTCCCAGCAGTACGCCCCGGACTCGATCCACGGCCGCCAGTACTACGAACCGAC
GCGGTACGGAGCGGAGGCGAGATACGCGGACGTCGTGGAGCGCGTGCGCGAACGCCTGAAGGGGGACGGCTAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.581	95.556	0.436