Detailed information NTG0923889

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AB3470_RS15110
• Genome accession: NZ_CP162517
• Coordinates: 2815309..2816574 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BF12B1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2810309..2821574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3470_RS15090 (AB3470_15080)	yrrB	2811680..2812300 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
AB3470_RS15095 (AB3470_15085)	mnmA	2812386..2813501 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB3470_RS15100 (AB3470_15090)	iscSA	2813529..2814671 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
AB3470_RS15105 (AB3470_15095)	cymR	2814690..2815106 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AB3470_RS15110 (AB3470_15100)	rarA	2815309..2816574 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
AB3470_RS15115 (AB3470_15105)	tcdA	2816614..2817378 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
AB3470_RS15125 (AB3470_15115)	aspS	2817713..2819491 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
AB3470_RS15130 (AB3470_15120)	hisS	2819505..2820779 (-)	1275	WP_140599968.1	histidine--tRNA ligase	-
AB3470_RS15135 (AB3470_15125)	yrzK	2821161..2821331 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=923889 AB3470_RS15110 WP_015714437.1 2815309..2816574(+) (rarA) [Bacillus subtilis strain BF12B1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=923889 AB3470_RS15110 WP_015714437.1 2815309..2816574(+) (rarA) [Bacillus subtilis strain BF12B1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998