Detailed information NTG0919043

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: VNN51_RS05210
• Genome accession: NZ_CP141727
• Coordinates: 1038799..1039734 (+)
• Length: 311 a.a.
• NCBI ID: WP_213433136.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain M20011502 FF20a2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1033799..1044734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN51_RS05180 (VNN51_05180)	-	1034232..1034678 (+)	447	WP_096369051.1	Dps family protein	-
VNN51_RS05185 (VNN51_05185)	-	1034718..1035098 (-)	381	WP_017368654.1	rhodanese-like domain-containing protein	-
VNN51_RS05190 (VNN51_05190)	-	1035115..1036083 (-)	969	WP_017368653.1	ROK family glucokinase	-
VNN51_RS05195 (VNN51_05195)	-	1036076..1036288 (-)	213	WP_003133311.1	YqgQ family protein	-
VNN51_RS05200 (VNN51_05200)	typA	1036607..1038448 (+)	1842	WP_017368652.1	translational GTPase TypA	-
VNN51_RS05205 (VNN51_05205)	-	1038523..1038753 (+)	231	WP_017368651.1	DUF3165 family protein	-
VNN51_RS05210 (VNN51_05210)	comYH	1038799..1039734 (+)	936	WP_213433136.1	class I SAM-dependent methyltransferase	Machinery gene
VNN51_RS05215 (VNN51_05215)	-	1039819..1041012 (+)	1194	WP_346349647.1	acetate kinase	-
VNN51_RS05220 (VNN51_05220)	-	1041130..1042323 (+)	1194	WP_017368648.1	acetate kinase	-
VNN51_RS05225 (VNN51_05225)	pyrH	1042414..1043130 (+)	717	WP_017368647.1	UMP kinase	-
VNN51_RS05230 (VNN51_05230)	frr	1043159..1043716 (+)	558	WP_017368646.1	ribosome recycling factor	-
VNN51_RS05235 (VNN51_05235)	-	1043823..1044683 (+)	861	WP_017368645.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34961.97 Da
• Isoelectric Point: 4.5506

>NTDB_id=919043 VNN51_RS05210 WP_213433136.1 1038799..1039734(+) (comYH) [Lactococcus formosensis strain M20011502 FF20a2]
MDIEKIEKAFGLVLENIMAIQAELMTDFYDAFVEQNAAYLGALELASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRI
APMQANHNLTPDSIGFIFNFIIEELHKDRAIRVLEFGSGTGNLAETLLVHLQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQMDAVKPQPLEAVDVVLSDLPVGYYPDDEAASHFQVHDKSEHTYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHIAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=919043 VNN51_RS05210 WP_213433136.1 1038799..1039734(+) (comYH) [Lactococcus formosensis strain M20011502 FF20a2]
ATGGATATAGAGAAAATCGAAAAAGCTTTTGGATTGGTCCTTGAGAATATCATGGCAATTCAAGCAGAGCTGATGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCCTTAGAGCTGGCGTCACTGACGAAGGAAAATAACG
ATAAAGTTCGCTCAATGAATCTTACGAAAAGTGAATGGCAAAAGCTGTTTCAGTTTGTCTTGTTACAAGGCTCTCGTATT
GCACCGATGCAAGCAAATCATAATTTAACACCGGACTCTATTGGTTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
GGACCGAGCGATTCGCGTGTTAGAGTTTGGTTCAGGAACGGGGAATTTAGCGGAAACACTCTTGGTTCATCTGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGACGATCTCTTGTTGGATTTATCTGCTTCAATGTCAGAAGTTATGGGAACAGAA
GCAAGTTTTCTCCAAATGGATGCTGTTAAACCTCAGCCCTTGGAAGCTGTGGACGTTGTCCTAAGTGATCTCCCAGTTGG
TTATTATCCAGATGATGAAGCTGCTAGCCATTTTCAAGTACATGACAAATCAGAACATACCTATGTGCACCACTTAATGA
TCGAGCAATCCTTCAAGTATTTGAAAGAGAGTGGCTTTGCACTTTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAGTTTTTGAAGGCCTGGATTAAAGAACATGCGCATATTGCTGCAGTCATTACATTACCTTCATCCCTCTTTAAAGG
GGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGACTTAGCAG
ACCGCTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (173-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	50	99.678	0.498
comYH	Streptococcus mutans UA159	49.677	99.678	0.495