Detailed information NTG0918646

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN37_RS08895
• Genome accession: NZ_CP141707
• Coordinates: 1781537..1782406 (+)
• Length: 289 a.a.
• NCBI ID: WP_074749950.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain M21102102
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1776537..1787406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN37_RS08875 (VNN37_08875)	-	1776866..1777486 (+)	621	WP_004257227.1	GntR family transcriptional regulator	-
VNN37_RS08880 (VNN37_08880)	-	1777691..1778893 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN37_RS08885 (VNN37_08885)	-	1778886..1780610 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
VNN37_RS08890 (VNN37_08890)	budA	1780752..1781450 (+)	699	WP_074749952.1	acetolactate decarboxylase	-
VNN37_RS08895 (VNN37_08895)	dprA	1781537..1782406 (+)	870	WP_074749950.1	DNA-processing protein DprA	Machinery gene
VNN37_RS08900 (VNN37_08900)	topA	1782595..1784745 (+)	2151	WP_074749948.1	type I DNA topoisomerase	-
VNN37_RS08905 (VNN37_08905)	trmFO	1784791..1786134 (+)	1344	WP_264307788.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN37_RS08910 (VNN37_08910)	-	1786207..1786428 (-)	222	WP_074749946.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32799.96 Da
• Isoelectric Point: 9.5559

>NTDB_id=918646 VNN37_RS08895 WP_074749950.1 1781537..1782406(+) (dprA) [Lactococcus garvieae strain M21102102]
MIRNFEILRLKKAGVSNLGILKLIDYQEKHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQSFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=918646 VNN37_RS08895 WP_074749950.1 1781537..1782406(+) (dprA) [Lactococcus garvieae strain M21102102]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAGTGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAAAAGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATTGCAGAAGTCAAAGCTGTTCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACCCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAGATGTCTAAGGAAGCACCTAAAATTACATACAAGCTTATTGAGGAATTAAAACAAA
GCTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCCACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCGCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTATTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAAGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis SK321	54.122	96.54	0.522
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.405	96.54	0.516
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377