Detailed information NTG0918549

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: VNN52_RS04790
• Genome accession: NZ_CP141701
• Coordinates: 968284..969219 (+)
• Length: 311 a.a.
• NCBI ID: WP_407346669.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain M18012501 FF2g6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 963284..974219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN52_RS04760 (VNN52_04750)	-	963711..964157 (+)	447	WP_003133306.1	DNA starvation/stationary phase protection protein	-
VNN52_RS04765 (VNN52_04755)	-	964197..964577 (-)	381	WP_019292245.1	rhodanese-like domain-containing protein	-
VNN52_RS04770 (VNN52_04760)	-	964597..965562 (-)	966	WP_019292244.1	ROK family glucokinase	-
VNN52_RS04775 (VNN52_04765)	-	965555..965767 (-)	213	WP_003133311.1	YqgQ family protein	-
VNN52_RS04780 (VNN52_04770)	typA	966088..967929 (+)	1842	WP_019335381.1	translational GTPase TypA	-
VNN52_RS04785 (VNN52_04775)	-	968008..968238 (+)	231	WP_019292242.1	DUF3165 family protein	-
VNN52_RS04790 (VNN52_04780)	comYH	968284..969219 (+)	936	WP_407346669.1	class I SAM-dependent methyltransferase	Machinery gene
VNN52_RS04795 (VNN52_04785)	-	969304..970497 (+)	1194	WP_019292240.1	acetate kinase	-
VNN52_RS04800 (VNN52_04790)	-	970616..971809 (+)	1194	WP_019294231.1	acetate kinase	-
VNN52_RS04805 (VNN52_04795)	pyrH	971900..972616 (+)	717	WP_019292238.1	UMP kinase	-
VNN52_RS04810 (VNN52_04800)	frr	972645..973202 (+)	558	WP_017368646.1	ribosome recycling factor	-
VNN52_RS04815 (VNN52_04805)	-	973313..974173 (+)	861	WP_019292237.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35123.18 Da
• Isoelectric Point: 4.6120

>NTDB_id=918549 VNN52_RS04790 WP_407346669.1 968284..969219(+) (comYH) [Lactococcus petauri strain M18012501 FF2g6]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRLLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
VSFLQIDAVKPQPLEPVDVVMSDLPVGYYPDDETASHFQVHDKSEHTYVHHLMVEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=918549 VNN52_RS04790 WP_407346669.1 968284..969219(+) (comYH) [Lactococcus petauri strain M18012501 FF2g6]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTAGTTCTTGAGAATATTATGGCAATTCAAGCAGAGCTCTTGACTGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAATTTGCGTCACTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAATGGCAAAAGCTGTTTCAGTTTGTTTTGCTTCAGGGGTCACGTGTC
GCACCAATGCAGGCAAATCATAATTTAACTCCGGATTCTATTGGTTTCATCTTTAATTTTATCATTGAGGAGTTACACAA
AGAAAGAAAGATTCGTTTACTAGAATTTGGCTCAGGAACGGGGAATTTGGCGGAAACGCTTTTGGTTCACATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTGTCCGCTTCAATGTCAGAAGTCATGGGAACAGAA
GTAAGTTTTCTCCAAATCGATGCCGTTAAACCACAGCCCTTGGAACCTGTGGATGTTGTGATGAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAACAGCCAGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCATTTAATGG
TTGAGCAATCTTTCAAATATCTGAAAGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCTGAGTTTTTGAAGGCTTGGATTAAAGAGCATGCGCATGTTGCTGCAGTTATTACATTACCTTCATCACTCTTTAAAGG
TGCAGGGAAATCAATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTTAAGATTTGA

Domains

Predicted by InterProScan.

• N-6 DNA Methylase (N6_Mtase) (173-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	50	99.678	0.498
comYH	Streptococcus mutans UA159	49.677	99.678	0.495