Detailed information NTG0918188

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: VNN44_RS05010
• Genome accession: NZ_CP141689
• Coordinates: 1009398..1010333 (+)
• Length: 311 a.a.
• NCBI ID: WP_019292241.1
• Uniprot ID: A0AAJ2IZ38
• Organism: Lactococcus petauri strain R22-16 FS-A5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1004398..1015333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN44_RS04980 (VNN44_04980)	-	1004830..1005276 (+)	447	WP_003133306.1	Dps family protein	-
VNN44_RS04985 (VNN44_04985)	-	1005315..1005695 (-)	381	WP_019292245.1	rhodanese-like domain-containing protein	-
VNN44_RS04990 (VNN44_04990)	-	1005715..1006680 (-)	966	WP_061414320.1	ROK family glucokinase	-
VNN44_RS04995 (VNN44_04995)	-	1006673..1006885 (-)	213	WP_003133311.1	YqgQ family protein	-
VNN44_RS05000 (VNN44_05000)	typA	1007206..1009047 (+)	1842	WP_206888029.1	translational GTPase TypA	-
VNN44_RS05005 (VNN44_05005)	-	1009122..1009352 (+)	231	WP_019292242.1	DUF3165 family protein	-
VNN44_RS05010 (VNN44_05010)	comYH	1009398..1010333 (+)	936	WP_019292241.1	class I SAM-dependent methyltransferase	Machinery gene
VNN44_RS05015 (VNN44_05015)	-	1010418..1011611 (+)	1194	WP_019294232.1	acetate kinase	-
VNN44_RS05020 (VNN44_05020)	-	1011730..1012923 (+)	1194	WP_165720166.1	acetate kinase	-
VNN44_RS05025 (VNN44_05025)	pyrH	1013014..1013730 (+)	717	WP_019292238.1	UMP kinase	-
VNN44_RS05030 (VNN44_05030)	frr	1013759..1014316 (+)	558	WP_017368646.1	ribosome recycling factor	-
VNN44_RS05035 (VNN44_05035)	-	1014427..1015287 (+)	861	WP_206888026.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35095.12 Da
• Isoelectric Point: 4.6120

>NTDB_id=918188 VNN44_RS05010 WP_019292241.1 1009398..1010333(+) (comYH) [Lactococcus petauri strain R22-16 FS-A5]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRLLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQIDAVKPQPLEPVDVVMSDLPVGYYPDDETASHFQVHDKSEHTYVHHLMVEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=918188 VNN44_RS05010 WP_019292241.1 1009398..1010333(+) (comYH) [Lactococcus petauri strain R22-16 FS-A5]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTAGTTCTTGAGAATATTATGGCAATTCAAGCAGAGCTCTTGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAATTTGCGTCACTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAATGGCAAAAGCTGTTTCAGTTTGTTTTGCTTCAGGGGTCACGTGTC
GCACCAATGCAGGCAAATCATAATTTAACTCCGGATTCTATTGGTTTCATCTTTAATTTTATCATTGAGGAGTTACACAA
AGAAAGAAAGATTCGTTTACTAGAATTTGGCTCAGGAACGGGGAATTTGGCGGAAACGCTTTTGGTTCACATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTGTCCGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATCGATGCCGTTAAACCACAGCCCTTGGAACCTGTGGATGTTGTGATGAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAACAGCCAGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCATTTAATGG
TTGAGCAATCTTTCAAATATCTGAAAGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCTGAGTTTTTGAAGGCTTGGATTAAAGAGCATGCGCATGTTGCTGCAGTTATTACATTACCTTCATCACTCTTTAAAGG
TGCAGGGAAATCAATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTGTCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTTAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (173-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492