Detailed information NTG0918136

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AB1F75_RS07240
• Genome accession: NZ_CP160396
• Coordinates: 1413379..1414644 (-)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1408379..1419644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS07215 (AB1F75_07215)	yrzK	1408619..1408789 (+)	171	WP_004399157.1	YrzK family protein	-
AB1F75_RS07220 (AB1F75_07220)	hisS	1409171..1410445 (+)	1275	WP_015251569.1	histidine--tRNA ligase	-
AB1F75_RS07225 (AB1F75_07225)	aspS	1410459..1412237 (+)	1779	WP_015251570.1	aspartate--tRNA ligase	-
AB1F75_RS07235 (AB1F75_07235)	tcdA	1412573..1413337 (+)	765	WP_003229763.1	ThiF family adenylyltransferase	-
AB1F75_RS07240 (AB1F75_07240)	rarA	1413379..1414644 (-)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
AB1F75_RS07245 (AB1F75_07245)	cymR	1414847..1415262 (+)	416	Protein_1415	cysteine metabolism transcriptional regulator CymR	-
AB1F75_RS07250 (AB1F75_07250)	iscSA	1415281..1416423 (+)	1143	WP_003229769.1	cysteine desulfurase family protein	-
AB1F75_RS07255 (AB1F75_07255)	mnmA	1416451..1417566 (+)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB1F75_RS07260 (AB1F75_07260)	yrrB	1417652..1418272 (+)	621	WP_015251572.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=918136 AB1F75_RS07240 WP_004398500.1 1413379..1414644(-) (rarA) [Bacillus subtilis subsp. subtilis strain BSP1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=918136 AB1F75_RS07240 WP_004398500.1 1413379..1414644(-) (rarA) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCACGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1