Detailed information NTG0914284

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: U2S94_RS09015
• Genome accession: NZ_CP140434
• Coordinates: 1760826..1761527 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2023CK-01274
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1755826..1766527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2S94_RS08980 (U2S94_08985)	kdsB	1756349..1757110 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U2S94_RS08985 (U2S94_08990)	-	1757122..1758102 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
U2S94_RS08990 (U2S94_08995)	-	1758114..1758455 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
U2S94_RS08995 (U2S94_09000)	-	1758473..1759246 (+)	774	WP_000497298.1	TatD family hydrolase	-
U2S94_RS09000 (U2S94_09005)	-	1759284..1759892 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
U2S94_RS09005 (U2S94_09010)	-	1759902..1760456 (+)	555	WP_000841373.1	type II secretion system protein	-
U2S94_RS09010 (U2S94_09015)	xcpV	1760446..1760826 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
U2S94_RS09015 (U2S94_09020)	xcpW	1760826..1761527 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
U2S94_RS09020 (U2S94_09025)	gspK	1761527..1762486 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
U2S94_RS09025 (U2S94_09030)	-	1762717..1763313 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
U2S94_RS09030 (U2S94_09035)	ung	1763364..1764077 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
U2S94_RS09035 (U2S94_09040)	-	1764074..1765198 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
U2S94_RS09040 (U2S94_09045)	tadA	1765205..1765708 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
U2S94_RS09045 (U2S94_09050)	-	1765777..1766220 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=914284 U2S94_RS09015 WP_000594589.1 1760826..1761527(+) (xcpW) [Acinetobacter baumannii strain 2023CK-01274]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=914284 U2S94_RS09015 WP_000594589.1 1760826..1761527(+) (xcpW) [Acinetobacter baumannii strain 2023CK-01274]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996