Detailed information NTG0913437

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: U2873_RS12765
• Genome accession: NZ_CP140276
• Coordinates: 2460657..2463041 (-)
• Length: 794 a.a.
• NCBI ID: WP_108611463.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain F7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2455657..2468041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2873_RS12730 (U2873_12730)	-	2456760..2457488 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
U2873_RS12735 (U2873_12735)	-	2457503..2458312 (+)	810	WP_008342689.1	transporter substrate-binding domain-containing protein	-
U2873_RS12740 (U2873_12740)	-	2458393..2459046 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
U2873_RS12745 (U2873_12745)	-	2459062..2459712 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
U2873_RS12750 (U2873_12750)	-	2459751..2459882 (-)	132	WP_008362324.1	YrzQ family protein	-
U2873_RS12755 (U2873_12755)	-	2459903..2460094 (-)	192	WP_003216308.1	hypothetical protein	-
U2873_RS12760 (U2873_12760)	-	2460108..2460566 (-)	459	WP_019743027.1	PRC-barrel domain-containing protein	-
U2873_RS12765 (U2873_12765)	recD2	2460657..2463041 (-)	2385	WP_108611463.1	ATP-dependent RecD-like DNA helicase	Machinery gene
U2873_RS12770 (U2873_12770)	-	2463061..2463714 (-)	654	WP_322535892.1	tetratricopeptide repeat protein	-
U2873_RS12775 (U2873_12775)	mnmA	2463776..2464894 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
U2873_RS12780 (U2873_12780)	-	2464989..2466131 (-)	1143	WP_008342711.1	cysteine desulfurase family protein	-
U2873_RS12785 (U2873_12785)	cymR	2466150..2466569 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88959.35 Da
• Isoelectric Point: 5.0189

>NTDB_id=913437 U2873_RS12765 WP_108611463.1 2460657..2463041(-) (recD2) [Bacillus altitudinis strain F7]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQVIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=913437 U2873_RS12765 WP_108611463.1 2460657..2463041(-) (recD2) [Bacillus altitudinis strain F7]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAACAAGGCATTATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGTTAGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCTGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTAGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAACTACTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATTATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTCGCACTCGGTGAACTGGAGGAACGGCTGGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGTTATACC
GGCAGTTACACTAACTGATATTTATCGGCAGGCAGATGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGTTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTCCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCATTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGAGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACTGAAAAAGAAGATATGGCGGTTATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACTATGCGTCTTACTGAAACGGAAGAAGTCATGGATGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.377	100	0.805