Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   L6432_RS11110 Genome accession   NZ_AP025339
Coordinates   2204957..2207272 (-) Length   771 a.a.
NCBI ID   WP_020452789.1    Uniprot ID   D9YRL1
Organism   Bacillus paralicheniformis strain J25TS1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2199957..2212272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6432_RS11070 - 2200422..2200853 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  L6432_RS11075 - 2200853..2201194 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  L6432_RS11080 - 2201187..2202665 (+) 1479 WP_025809735.1 Na+/H+ antiporter subunit D -
  L6432_RS11085 - 2202671..2203147 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  L6432_RS11090 - 2203147..2203431 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  L6432_RS11095 mnhG 2203415..2203789 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  L6432_RS11100 - 2203826..2204215 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  L6432_RS11105 comA 2204232..2204870 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  L6432_RS11110 comP 2204957..2207272 (-) 2316 WP_020452789.1 sensor histidine kinase Regulator
  L6432_RS11115 comX 2207293..2207463 (-) 171 WP_020452790.1 competence pheromone ComX -
  L6432_RS11120 - 2207435..2208346 (-) 912 WP_035337591.1 polyprenyl synthetase family protein -
  L6432_RS11125 degQ 2208533..2208673 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  L6432_RS11130 - 2209159..2209506 (+) 348 WP_223254849.1 hypothetical protein -
  L6432_RS11135 - 2209549..2210769 (-) 1221 WP_035337594.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 771 a.a.        Molecular weight: 89288.10 Da        Isoelectric Point: 7.0414

>NTDB_id=91329 L6432_RS11110 WP_020452789.1 2204957..2207272(-) (comP) [Bacillus paralicheniformis strain J25TS1]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=91329 L6432_RS11110 WP_020452789.1 2204957..2207272(-) (comP) [Bacillus paralicheniformis strain J25TS1]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGC
ATTAACTTATTGTCGTTCTTTATTTCGACGGTCATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGTAAA
ATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAAA
ACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(682-769)

Histidine kinase (HisKA_3)

(570-639)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D9YRL1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.419

100

0.537

Multiple sequence alignment