Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ABII15_RS12765 Genome accession   NZ_CP159534
Coordinates   2753917..2755656 (+) Length   579 a.a.
NCBI ID   WP_353942427.1    Uniprot ID   A0AAU8IRF7
Organism   Streptomyces sp. HUAS MG91     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2748917..2760656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABII15_RS12735 (ABII15_12735) - 2749496..2750800 (+) 1305 WP_353942424.1 phospholipase D-like domain-containing protein -
  ABII15_RS12755 (ABII15_12755) - 2751952..2752263 (+) 312 WP_353942425.1 YtxH domain-containing protein -
  ABII15_RS12760 (ABII15_12760) - 2752302..2753738 (+) 1437 WP_353942426.1 FGGY family carbohydrate kinase -
  ABII15_RS12765 (ABII15_12765) rcrP 2753917..2755656 (+) 1740 WP_353942427.1 ABC transporter ATP-binding protein Regulator
  ABII15_RS12770 (ABII15_12770) rcrQ 2755656..2757584 (+) 1929 WP_353942428.1 ABC transporter ATP-binding protein Regulator
  ABII15_RS12775 (ABII15_12775) - 2757676..2758983 (-) 1308 WP_353942429.1 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 62942.02 Da        Isoelectric Point: 5.2581

>NTDB_id=912698 ABII15_RS12765 WP_353942427.1 2753917..2755656(+) (rcrP) [Streptomyces sp. HUAS MG91]
MLIRLLRTYLSPYKKPIGLLVLLQFLQTCAALYLPTLNADIIDNGVVDGDTGYILTYGALMLGVTVVQVVCNTGAVYFGA
RTAAALGRDVRAGVFDRVQSFSAREVGRFGAPSLITRTTNDVQQIQMLVLMGFTLMVSAPIMCVGGVILALGLDVPLSGV
LLAVLPVMAIVLTLIIRKMRPLFRSMQVKLDTVNRVLREQITGNRVIRAFVRDDFEKDRFGVANWDLTETSLATGRIMAL
MFPFVMTIVNVASVAVVWFGAHRINSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMQVPRAEVCAERVQEVLDTESSVVP
PAADTSVRELRRHGHLEIRGAEFGYPGAEEPVLRSVDLVARPGETTAIIGSTGSGKSTLLGLVPRLYDTTAGVVFVDGED
VRGIDPELMARTVGLVPQKPYLFSGTVASNLRYGRPDATDEELWHALEVAQAKDFVSKLEGGLDAPIAQGGTNVSGGQRQ
RLAIARTLVQRPEIYLFDDSFSALDYATDAALRRALGDETAEATVVIVAQRVATIRDADRIIVLDEGRVVGTGRHHELMA
DNETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=912698 ABII15_RS12765 WP_353942427.1 2753917..2755656(+) (rcrP) [Streptomyces sp. HUAS MG91]
GTGCTCATACGACTCCTGCGGACCTATCTCAGTCCGTACAAGAAACCCATCGGGTTGCTCGTCCTGCTGCAGTTCCTGCA
GACCTGTGCGGCCCTGTATCTGCCCACTCTGAACGCGGACATCATCGACAACGGTGTCGTCGACGGGGACACCGGCTACA
TCCTCACGTACGGCGCCCTGATGCTGGGCGTCACGGTCGTCCAGGTCGTCTGCAACACCGGCGCCGTGTACTTCGGCGCC
CGCACCGCCGCCGCGCTCGGCCGTGACGTGCGGGCCGGGGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGCGAGGTCGG
CCGCTTCGGGGCGCCCTCGCTGATCACCCGCACCACGAACGACGTGCAGCAGATCCAGATGCTGGTCCTGATGGGCTTCA
CGCTGATGGTGTCCGCGCCGATCATGTGCGTCGGCGGTGTGATCCTCGCCCTGGGGCTCGACGTGCCCCTGTCGGGCGTG
CTCCTTGCCGTGCTGCCCGTCATGGCGATCGTGCTGACGCTGATCATCCGCAAGATGCGGCCGCTGTTCCGGTCCATGCA
GGTCAAGCTGGACACCGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTGCGTGACG
ACTTCGAGAAGGACCGGTTCGGCGTCGCCAACTGGGACCTGACCGAGACCTCGCTGGCCACCGGCCGGATCATGGCACTG
ATGTTCCCGTTCGTGATGACGATCGTGAACGTCGCCTCCGTGGCCGTGGTCTGGTTCGGCGCCCACCGCATCAACAGCGG
CGGCATGCAGATCGGCGACCTGACGGCGTTCCTCGCGTATCTCATGCAGATCGTGATGAGTGTGATGATGGCCACCTTCA
TGTTCATGCAGGTGCCGCGCGCCGAGGTGTGCGCGGAGCGCGTGCAGGAGGTACTCGACACCGAGTCCAGCGTCGTCCCG
CCCGCCGCCGACACCTCCGTACGGGAACTGCGCCGGCACGGGCACCTGGAGATCCGCGGCGCCGAGTTCGGCTACCCGGG
CGCCGAGGAGCCGGTGCTGCGGTCGGTGGACCTCGTGGCCCGGCCCGGGGAGACCACGGCGATCATCGGCTCGACCGGCA
GCGGCAAGTCGACACTGCTCGGCCTGGTCCCCCGGCTGTACGACACCACGGCGGGCGTCGTGTTCGTGGACGGGGAGGAC
GTCCGCGGGATCGACCCCGAGCTGATGGCGAGGACGGTCGGACTCGTCCCGCAGAAGCCCTATCTGTTCTCGGGGACGGT
CGCCTCCAACCTCCGGTACGGGCGTCCCGACGCGACCGACGAGGAGCTGTGGCACGCCCTTGAGGTGGCACAGGCCAAGG
ATTTCGTGAGCAAGCTGGAGGGCGGGCTCGACGCGCCGATCGCCCAGGGCGGGACGAACGTCTCCGGCGGCCAGCGCCAG
CGGCTCGCGATCGCGCGCACGCTCGTCCAGCGGCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGC
GACAGACGCGGCGCTGCGCCGGGCGCTCGGTGACGAGACCGCCGAGGCGACCGTGGTGATCGTGGCCCAGCGCGTGGCCA
CCATCCGGGACGCCGACCGGATCATCGTCCTCGACGAGGGCCGGGTCGTCGGCACCGGACGCCACCACGAGCTGATGGCC
GACAACGAGACGTACCGGGAGATCGTTCTCTCCCAGCTGACGGAAGCGGAGGCCGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(354-500)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAU8IRF7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.32

97.237

0.392