Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ABVR74_RS10480 Genome accession   NZ_CP159484
Coordinates   2117744..2118526 (-) Length   260 a.a.
NCBI ID   WP_023188991.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain CBA3648     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2112744..2123526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVR74_RS10450 (ABVR74_10450) - 2113049..2114038 (-) 990 WP_029344853.1 mevalonate kinase -
  ABVR74_RS10455 (ABVR74_10455) mvaD 2114025..2114981 (-) 957 WP_058212449.1 diphosphomevalonate decarboxylase -
  ABVR74_RS10460 (ABVR74_10460) mvk 2115287..2116219 (+) 933 WP_003131564.1 mevalonate kinase -
  ABVR74_RS10465 (ABVR74_10465) - 2116282..2116473 (+) 192 WP_012897234.1 hypothetical protein -
  ABVR74_RS10470 (ABVR74_10470) rsmI 2116550..2117425 (-) 876 WP_058204088.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ABVR74_RS10475 (ABVR74_10475) yabA 2117425..2117751 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  ABVR74_RS10480 (ABVR74_10480) yaaT 2117744..2118526 (-) 783 WP_023188991.1 stage 0 sporulation family protein Regulator
  ABVR74_RS10485 (ABVR74_10485) - 2118578..2119438 (-) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  ABVR74_RS10490 (ABVR74_10490) tmk 2119571..2120206 (-) 636 WP_012897230.1 dTMP kinase -
  ABVR74_RS10495 (ABVR74_10495) yycF 2120384..2121085 (+) 702 WP_003131580.1 response regulator YycF -
  ABVR74_RS10500 (ABVR74_10500) vicK 2121078..2122520 (+) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ABVR74_RS10505 (ABVR74_10505) vicX 2122689..2123501 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29817.30 Da        Isoelectric Point: 6.0566

>NTDB_id=911682 ABVR74_RS10480 WP_023188991.1 2117744..2118526(-) (yaaT) [Lactococcus lactis subsp. lactis strain CBA3648]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=911682 ABVR74_RS10480 WP_023188991.1 2117744..2118526(-) (yaaT) [Lactococcus lactis subsp. lactis strain CBA3648]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385