Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   U0320_RS11290 Genome accession   NZ_CP139868
Coordinates   2196099..2196986 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GP11     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2191099..2201986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0320_RS11260 (U0320_11245) - 2191116..2191208 (+) 93 WP_010956583.1 hypothetical protein -
  U0320_RS11265 (U0320_11250) - 2191316..2191813 (-) 498 WP_001065268.1 glutathione peroxidase -
  U0320_RS11270 (U0320_11255) - 2191823..2192083 (-) 261 WP_001791974.1 hypothetical protein -
  U0320_RS11275 (U0320_11260) - 2192465..2192579 (-) 115 Protein_2161 hypothetical protein -
  U0320_RS11280 (U0320_11265) - 2193238..2195238 (-) 2001 WP_045178208.1 ABC transporter permease -
  U0320_RS11285 (U0320_11270) - 2195235..2195990 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  U0320_RS11290 (U0320_11275) braS 2196099..2196986 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  U0320_RS11295 (U0320_11280) nsaR 2196997..2197661 (-) 665 Protein_2165 nisin susceptibility-associated two-component system response regulator NsaR -
  U0320_RS11300 (U0320_11285) - 2197687..2197887 (-) 201 WP_000604727.1 hypothetical protein -
  U0320_RS11305 (U0320_11290) - 2198085..2199509 (+) 1425 WP_000953748.1 alkaline phosphatase -
  U0320_RS14175 - 2199569..2199670 (-) 102 WP_000731976.1 SE2200 family small protein -
  U0320_RS11315 (U0320_11300) - 2199792..2200247 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  U0320_RS11320 (U0320_11305) - 2200492..2201253 (-) 762 WP_000323446.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=911643 U0320_RS11290 WP_000143426.1 2196099..2196986(-) (braS) [Staphylococcus aureus strain GP11]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=911643 U0320_RS11290 WP_000143426.1 2196099..2196986(-) (braS) [Staphylococcus aureus strain GP11]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997