NTDB

Overview

Name	rcrP	Type	Regulator
Locus tag	U0449_RS06880	Genome accession	NZ_CP139862
Coordinates	1354683..1355504 (+)	Length	273 a.a.
NCBI ID	WP_000601682.1	Uniprot ID	A0A4K3G7N8
Organism	Streptococcus pneumoniae strain 05H0020-2
Function	regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 1349683..1360504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0449_RS06855	-	1350041..1350649 (+)	609	WP_000083614.1	hypothetical protein	-
U0449_RS06860	-	1350642..1351052 (+)	411	WP_000595757.1	hypothetical protein	-
U0449_RS06865	ply	1351063..1352472 (+)	1410	WP_001284356.1	cholesterol-dependent cytolysin pneumolysin	-
U0449_RS06870	-	1353355..1354071 (+)	717	WP_000532876.1	YebC/PmpR family DNA-binding transcriptional regulator	-
U0449_RS06875	-	1354195..1354666 (+)	472	Protein_1331	MarR family winged helix-turn-helix transcriptional regulator	-
U0449_RS06880	rcrP	1354683..1355504 (+)	822	WP_000601682.1	ABC transporter permease	Regulator
U0449_RS06885	-	1355697..1356542 (+)	846	Protein_1333	ATP-binding cassette domain-containing protein	-
U0449_RS06890	-	1356608..1356970 (+)	363	WP_000078804.1	DUF2200 domain-containing protein	-
U0449_RS06895	-	1356967..1357470 (+)	504	WP_000800943.1	phosphatase PAP2 family protein	-
U0449_RS06900	-	1357584..1358030 (+)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
U0449_RS06905	-	1358035..1358709 (+)	675	WP_000725720.1	LiaF transmembrane domain-containing protein	-
U0449_RS06910	-	1358955..1359152 (+)	198	Protein_1338	N-acetylmuramoyl-L-alanine amidase family protein	-
U0449_RS06915	-	1359177..1359308 (-)	132	WP_044792126.1	hypothetical protein	-
U0449_RS06920	-	1359402..1359701 (+)	300	WP_050218994.1	DUF4651 domain-containing protein	-
U0449_RS06925	-	1359698..1360015 (+)	318	WP_000615767.1	thioredoxin family protein	-

Sequence

Protein

Download Length: 273 a.a. Molecular weight: 30604.17 Da Isoelectric Point: 5.9310

                                >NTDB_id=911509 U0449_RS06880 WP_000601682.1 1354683..1355504(+) (rcrP) [Streptococcus pneumoniae strain 05H0020-2]

MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI

FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV

LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV

AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide

Download Length: 822 bp

                                >NTDB_id=911509 U0449_RS06880 WP_000601682.1 1354683..1355504(+) (rcrP) [Streptococcus pneumoniae strain 05H0020-2]

ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC

GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG

CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT

TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA

CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG

GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT

TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT

AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA

CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA

GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT

TTTCATGTCTTATGCCATGTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(3-271)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A4K3G7N8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
rcrP	Streptococcus mutans UA159	56.842	100	0.593

Detailed information NTG0911509