Detailed information NTG0908381

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI72_RS09995
• Genome accession: NZ_CP139255
• Coordinates: 2095846..2096661 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain MCR16048
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2090846..2101661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI72_RS09965 (SOI72_09965)	-	2091154..2091594 (-)	441	WP_002121449.1	SRPBCC family protein	-
SOI72_RS09970 (SOI72_09970)	tadA	2091665..2092168 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI72_RS09975 (SOI72_09975)	hibch	2092174..2093298 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
SOI72_RS09980 (SOI72_09980)	ung	2093295..2094008 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
SOI72_RS09985 (SOI72_09985)	-	2094062..2094658 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI72_RS09990 (SOI72_09990)	gspK	2094886..2095845 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
SOI72_RS09995 (SOI72_09995)	xcpW	2095846..2096661 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI72_RS10000 (SOI72_10000)	xcpV	2096661..2097041 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI72_RS10005 (SOI72_10005)	-	2097031..2097585 (-)	555	WP_002121405.1	type II secretion system protein	-
SOI72_RS10010 (SOI72_10010)	-	2097592..2098200 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
SOI72_RS10015 (SOI72_10015)	ycfH	2098237..2099010 (-)	774	WP_002121462.1	TatD family hydrolase	-
SOI72_RS10020 (SOI72_10020)	pilZ	2099028..2099369 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI72_RS10025 (SOI72_10025)	holB	2099380..2100360 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
SOI72_RS10030 (SOI72_10030)	kdsB	2100374..2101135 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=908381 SOI72_RS09995 WP_002121460.1 2095846..2096661(-) (xcpW) [Acinetobacter pittii strain MCR16048]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=908381 SOI72_RS09995 WP_002121460.1 2095846..2096661(-) (xcpW) [Acinetobacter pittii strain MCR16048]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738