Detailed information NTG0907736

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABMY60_RS22940
• Genome accession: NZ_CP158147
• Coordinates: 4645941..4646966 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain FDN-24
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4640941..4651966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABMY60_RS22910 (ABMY60_22910)	zapB	4641025..4641270 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ABMY60_RS22915 (ABMY60_22915)	rraA	4641355..4641840 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABMY60_RS22920 (ABMY60_22920)	menA	4641933..4642859 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABMY60_RS22925 (ABMY60_22925)	hslU	4642926..4644257 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABMY60_RS22930 (ABMY60_22930)	hslV	4644267..4644797 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABMY60_RS22935 (ABMY60_22935)	ftsN	4644890..4645849 (-)	960	WP_000068828.1	cell division protein FtsN	-
ABMY60_RS22940 (ABMY60_22940)	cytR	4645941..4646966 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABMY60_RS22945 (ABMY60_22945)	priA	4647122..4649320 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABMY60_RS22950 (ABMY60_22950)	rpmE	4649523..4649735 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ABMY60_RS22955 (ABMY60_22955)	yiiX	4649796..4650404 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABMY60_RS22960 (ABMY60_22960)	metJ	4650588..4650905 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=907736 ABMY60_RS22940 WP_000644904.1 4645941..4646966(-) (cytR) [Escherichia coli strain FDN-24]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=907736 ABMY60_RS22940 WP_000644904.1 4645941..4646966(-) (cytR) [Escherichia coli strain FDN-24]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628